| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2022 |
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| Symbol | |
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| ID | 6368356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2152573 |
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| End bp | 2154819 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642677434 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001952258 |
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| Protein GI | 189425081 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAG CTGTACATTT GGCACTTGTC TTTTGGGTGC TGAGTATTTT CTTGAGCGGT
TGTAGCAAGA ATGAAAAGCT TATAGTCGGT TTTGCCGATG CCCAAAAAGC CAGGATCGGC
GTGATGACCG GTTCAACCGG CGAGGCTGTT GCTGCCAAGC GGTTTCCCAA AGCCCAGGTC
AAGAGTTTTG ACGACATCAT GGATGCTGTT GCAGCCATAA AATCAGGGCA GCTGGATGCG
ATCATCACCC TGTTTCCGGC TGCCCTGCAG GTCTCAAAAA AGAATCCTGA ATTAAGAATC
CTGCCGGAGC CGCTTGATTT TGAAGATACC GCCATTGCCG TCAGAAAAGA CAATGATCAG
TTGCTGGCAA CGGTGGATCG GATTGTTGCT GCACTGAAAG CTGACGGCAC GCTGGCGGAT
ATGGAAAAAC GGTGGTTGAA GCCGGATTTA AGTCCGTATC AAGAACTTGA TGTCGTACCA
CTCAGGCAGG GCAAGATCCT CAAAATAGGG GTGAGCGCCA CACGGGAGCC GTTCAGTTTT
GTAGATGACC ACGGCAGAGT GTCAGGTTTT GACGGTGAAC TGGCCCGTAT CATTGCTGTA
AAACTTCAGA GACCGGTTGA ATTTTTTAAT ATGAAATTCA TGGCATTGAT TCCGGCCCTG
CAGTCGGGCA AGGTTGATCT GATCATCAGC GGCATGACAG CAACCAGTGA GCGCAAAAAG
ACAGTCAACT TTACACAGCC CTATTTTGCC AATAAACAGG TCATGCTGGT CAGAAAACCC
GCTGTTGCGC CTCTTTCTAC AGTATCAGAC AGGTCAGAGC TGAGCACGCT TAACAGCTTG
AAAGGCAAAC GGATCTGCGT TCTGCCCGGC TCGGCGGGCG AAATGGCAGC CCGTCAAAAA
TTTTCAGGCT CGCAATTCCA GGTTTTTACG GCAGCAGCGG ACGCCGCCCT GGCGATTACG
ACCAATAAGG CGGATGCCTT TGTCTATGAC AAAAGCGTAC TGTTGAATCT GGCTGAAAAG
AATCCGGAGC TGATGATTCT TGATCAAGCG GTGGATAAAC TGGAAGTGGC TGCAGCGCTC
AGAAAGGATA ATACCGCACT GCTTTCAGAA ATGAACAAGG CATTACAAAG CTTGAAACAG
GAAGGTGAAC TGCAGCGCCT GAGAACAAAA TGGGTTGATA CAAAATACAC CGCCACCCCG
CAGCTGCAGC CCGCTAAAGC TGTGCATACC AGCGGTGTGC TGCGGATGGG AACCTGCGCC
AACCTTGAAC CGTTTTCATT CCAGTCAAAC GGCATCATCA CCGGGCTTGA CCGTGAACTG
AGCCAGCTGC TCGGGGAACG TCTCAATAAA AAAATAGAGA TCATCGACAT GAATTTTGAA
GCCCTGATTC CAGCGCTGCA ATCAGGCAAG ATTGACTTTG CACTCTCCAA TTTCAACGTG
ACAGAAGAGC GGAAGAAGCT GATCAATTTT TCTGTTCCCT ATATTACAAA TGATATATCG
GTGCTGGTCA GAAAGACCGG CTCATCTGCG ACAACGGCCG CTCCCTCCTT TTTCAGCGAC
CTTGTCACCA GTTTTCAGAG CAACATCATC CATGAGATGC GGTATCTGCT GATCCTGGAC
GGTCTCAAGA CCACCGTGGT CATTTCGGTC TTCGCCACCC TCTTCGGCAC CCTGCTGGGG
GCGCTGATCT GCTTCATGCG GATGGCAAAG AGCAGGCTGC TCTCTGCCCC TGCCAGGCTC
TACATCGCCA TCCTGCGGGG CACACCGGTA CTGGTGCTGT TGATGCTGAT CTTCTATGTC
GTCTTTGCCT CAATCAACAT CAGCCCGGTC ATTGTGGCGG TGATCGCCTT TGGGATGAAC
TTCGGCGCCT ACACCGCCGA GATCTTCAGG ACCGGCATTG AAGGGGTGGA AAAGGGGCAG
ACCGAGGCTG GTATCTCTTT AGGCTTCACC AGGACCAGCA CCTTCCTGCA TATTGTACTG
CCCCAGATGG TGCGGCGGAT CCTGCCGGTC TACAAAGGCG AGTTCATCTC CCTGGTCAAG
ATGACCTCCA TTGTCGGCTA CATCGCCGTA CAGGATCTGA CCAAGGCCAG CGACATCATC
CGCAGCCGCA CCTTTGACGC CTTCTTTCCC CTGGTCATGG TGGCCATCCT CTACTTCCTG
ATCTCATGGA CACTGATGCA ATCCCTTGAG TACCTGGAAC GGATCACTGA TCCCAAATAC
AAAAAGAGAA AGGCAGGCAG GGCATGA
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| Protein sequence | MIKAVHLALV FWVLSIFLSG CSKNEKLIVG FADAQKARIG VMTGSTGEAV AAKRFPKAQV
KSFDDIMDAV AAIKSGQLDA IITLFPAALQ VSKKNPELRI LPEPLDFEDT AIAVRKDNDQ
LLATVDRIVA ALKADGTLAD MEKRWLKPDL SPYQELDVVP LRQGKILKIG VSATREPFSF
VDDHGRVSGF DGELARIIAV KLQRPVEFFN MKFMALIPAL QSGKVDLIIS GMTATSERKK
TVNFTQPYFA NKQVMLVRKP AVAPLSTVSD RSELSTLNSL KGKRICVLPG SAGEMAARQK
FSGSQFQVFT AAADAALAIT TNKADAFVYD KSVLLNLAEK NPELMILDQA VDKLEVAAAL
RKDNTALLSE MNKALQSLKQ EGELQRLRTK WVDTKYTATP QLQPAKAVHT SGVLRMGTCA
NLEPFSFQSN GIITGLDREL SQLLGERLNK KIEIIDMNFE ALIPALQSGK IDFALSNFNV
TEERKKLINF SVPYITNDIS VLVRKTGSSA TTAAPSFFSD LVTSFQSNII HEMRYLLILD
GLKTTVVISV FATLFGTLLG ALICFMRMAK SRLLSAPARL YIAILRGTPV LVLLMLIFYV
VFASINISPV IVAVIAFGMN FGAYTAEIFR TGIEGVEKGQ TEAGISLGFT RTSTFLHIVL
PQMVRRILPV YKGEFISLVK MTSIVGYIAV QDLTKASDII RSRTFDAFFP LVMVAILYFL
ISWTLMQSLE YLERITDPKY KKRKAGRA
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