Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1989 |
Symbol | |
ID | 6366335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 2113624 |
End bp | 2117211 |
Gene Length | 3588 bp |
Protein Length | 1195 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642677401 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001952225 |
Protein GI | 189425048 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTA CCTCTTTTAC CAAAAGTCCG CCTCGCCACT GGGCCATCTT CAGCCTTACC GTACTGATGC TGGGCCTGTT GCTGTTTTTG TATCTTTTCC GGGAGCACGA ACGGGCAGGG ATGCGTGAGC AAGAGCAACT TCTGCGAAAA GCTGAGATCA TCAGTAAAAA TACGGCTTGG AACCTGGAGT CGCTGAACAA GCTTTTGCTC AGTCTGCAAA AAGATCCTGC CCTGCTGGCA AATGACCCCG GTTATAATCA ACGTTTTGAA GACCTGGCAA ATGCCATGCC CGGTATTCGC ACCATAGTGC GGCTGGATGC CCTGGGCATC ACCCGCCTCT CCAGCAGGGC TGAACTGCTG GGTAAAGGCT TCAGTGACCG TGATTACTTC CTGATTCCGC AGCAACAGGC CGGTAAGGAG TTGCTATATG TCTCACCCCC TTTCAGGACA GCCCTGAACA CCTATGTGAT CAACCTGAGC AGGTCACTAC GCAATCCTGA CGGCAGCTTT GCCGGCGTCA TTGCAGCCTC CCTTGATCCT GATTACTTCA GCAGCCTGCT TTTATCCGTC TTGTACGCAC CGGACATGCG TTCTGCACTG GCGCACTGGG ATGGCCTGCT CTTTCTCATG GAACCCGGCC ACAAAGAATT TATCGGAAAA AACCTGGCCG TCCCGGGCAG TTTCTTCAGC AGGCACCGTG CGAGCGGCAA GCAACAAACG GTGCACACCG GCACTGTCTA CGCCACCGGC AGAAACCAGA TGATGGCACA GATCACCATC CAGCCCGAAT CGCTGAAGAT GAACAAGCCG TTGGTGGTGG CGGTTTCCCG TGATCTTGAC GTTGTGTATG CCGACTGGCG GAGCGAAGCA ATTCTACTGG GATCGCTGTT TCTGCTGTCT GCAACCGTAG CCGGTTTTAC CCTGCATTTT TTCCACAAAC GGCATGAGGA GTTTACCCGG CAGAAAGCGG CGTCGGATGA AAGTATCCGT AAACTGAATG AGGAGCTGGA TCGGTTCTTC AGCATGGCCC TGGATATGCT CTGCATAGCA GATCTGGATG GCCACTTCAA GCGGTTGAAC CGTTCCTGGG AAGAAACACT CGGCTATGCC CTTGACGAGC TGACCGGGAA ACAGTTTCTT GAGTTTATCC ATCCCGATGA CATTCCGGCT ACCCTGGCAG CCCTGTCCGA TCTGGATGCA AACAAACAGA TTCTCAATTT TATCAATCGC TACCGTTGCA AGGATGGCTC CTACCGCTGG ATCGAATGGC GTTCAACCCC CTGTGCCAAC CTGATTTATG CTGCTGCACG GGACATTACT GAACGTAAGA ACGCCGAAGC CGCACTTGAG GAGAGTGAAC GGTTCATGCG GGTGTTGACC GACATCATTC CCGGCATGGT GGGCTACTGG GACAGAGATT TACATAACCG CTTTGCCAAT ATTGCCTACC TGGAGTGGTT TGGAAAAACA TCTGAGCAGA TGCGCGGCAT CCATATTCGA GACCTGATGG GTGACGAGCT GTTCGCTAAA AATGAACCAT ACATGCGGGC AGCGCTGAAC GGAGAACGGC AACGCTTTGA ACGCACCCTC ACCAAGGCTG ACGGCAGCAT TGGTTATACC TGGGCCCACT ATATACCGGA TATCGCCAAT GGACAGGTCA GGGGCTTCTT TGTCCTGGTA TCTGATATTA CGGAACTGAA ACTGACCCAG CTGCAACTGG AGCAACGTAC AAAAGAGGCC GAAGCTGCCA ATCGGGCAAA ATCAGAATTC CTCGCCAATA TGAGCCACGA GATCCGCACC CCGATGAACG CCATTCTTGG GTTGACCAGA CTGGTGCTTG AGACCGAGCT TGATCCGCGC CAGAGGGATT TTCTGCTCAA GGTCTACAAT GCATCGCAAG CTCTGATGGA AATCCTGAAT GATATTCTTG ACTATTCAAA AATCGAAGCC GGCCGGGTTG AAATAGAACA GTTACCGATC TCTGTGGAAG AGGTTGTCAG GAATACCATG GGGTTGTTCA GGGCTAAAAT TGAAGAAAAA GGGCTTGCCA CCATCATGGA ACTCGCCTCT TCCCTCCCTG CTGTGCTTCA GGGCGACCCG ATGCGCCTGT CACAAGTGCT CAACAACCTG GTGGGAAATG CCGTCAAGTT TACCGAAAGC GGAGAGATCC GCATCATGGT TGAACAGATA CAAGAAGACT GTAGAACGGT TACGCTCTGT TTTTCCGTGC AGGATACCGG CATCGGCCTC GACAAAGATG AAACAGCCCG GTTGTTCCAG GCCTTTACCC AGGCTGACAG CACCATCAGC CGCAAATACG GTGGCACCGG ATTGGGGTTG ACCATCTGCC AAAGACTGGT TGGACTGATG GGAGGTTCCA TCAGCGTCTC AAGCCTAAAA GGAGTTGGCA GCACCTTCAG TTTTGTCATT CAGATGGGTA AAGTTCCCCC GGGTACCCAG GCAAAGAAAC TGCATGCCTT TGCTGACGGT GCAATGGGTA CACCAGATTC TTTGGCAGTT TTATCAGCGC ACCAGAAGAA GCTTGAACTG AACAGGCTGC GTGTCCTGCT GGTGGAAGAC AACCGGATCA ATCAGGAGGT GGCTGCCGAG ATACTACAGC AATACGGCGC ACAGGTTACC CTTGCCGACC ATGGTGCTGC TGCGCTTGAG CTGCTTACCG GCCCCGGCTT TGACGTTGTT CTGATGGACC TGCATATGCC GGTAATGGAC GGATTTGAAG CCACCCGCAA AATCAGGGAG CTGTACGATA GTGCAACCCT GCCGGTGATT GCCATGACCG CTGCAGTCTT GCAGGATGAC CGTGAGCGCT GTACTGCAGC AGGCATGGTG GATTTTGTAG CCAAACCGAT CAACCCGCTG GAACTGGTGA CTGTGCTGAA ACGTTTTCAA AAAACAAGTT CACCATCATC AGTACCTCAT GAGGCTGCGA TCTCCCCCTT TGAGCCGAGT GATCCCGATT CGGCGCTACC AAGTTTAGAT GTCGCAACCG CCCTGCGTCG AATGGGCGGT CACAGCGAAT TATTGAACAG CCTGTTAAAA TCCTTTGCAA AGGAGCACGG CCTGTCGGCA GATGAGCTTA AAGCCTTGCT GTCTGAAGGT AAAACAGATG ACGCGCTGCA CCTGGCCCAT AACATAAAAG GCGTTTCCGG AACCGTTGGG GCAGTACGGC TGATGCAGGC GGCTGCAGCG TTGGAACAGC AACTGCGTTC AGATCCACGT CAGGCAGACC TGGACCTGTT TACCCGCGAG CTGGAGCTGG GCTTGTCTGC CATCAATCGT TATCTGCTCA GCCAGGAGCG GACCGTAACC GCTCCTGGCG GCGACCATAC GCCACTTGAT TATGAAAAAC TGCATCCCTT GTTGCAGGAA CTGACCACCT ATCTGCGTGA ACAGGAGCTT GCTCCTGAAC AGCTGCTGCA GCAGATCGTA AAGCTATCTG CCGGCACAGA CAGCCCGTTA CTCGCAAATC TGCTGCGTCA GCTGGACCGT TTTGACCATG CCGGCGCACT TGAGACAGTA CAACAGCTCA TTGCCGGGCT GACAGAGCAG CCCCACCAGC CACGATGA
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Protein sequence | MTSTSFTKSP PRHWAIFSLT VLMLGLLLFL YLFREHERAG MREQEQLLRK AEIISKNTAW NLESLNKLLL SLQKDPALLA NDPGYNQRFE DLANAMPGIR TIVRLDALGI TRLSSRAELL GKGFSDRDYF LIPQQQAGKE LLYVSPPFRT ALNTYVINLS RSLRNPDGSF AGVIAASLDP DYFSSLLLSV LYAPDMRSAL AHWDGLLFLM EPGHKEFIGK NLAVPGSFFS RHRASGKQQT VHTGTVYATG RNQMMAQITI QPESLKMNKP LVVAVSRDLD VVYADWRSEA ILLGSLFLLS ATVAGFTLHF FHKRHEEFTR QKAASDESIR KLNEELDRFF SMALDMLCIA DLDGHFKRLN RSWEETLGYA LDELTGKQFL EFIHPDDIPA TLAALSDLDA NKQILNFINR YRCKDGSYRW IEWRSTPCAN LIYAAARDIT ERKNAEAALE ESERFMRVLT DIIPGMVGYW DRDLHNRFAN IAYLEWFGKT SEQMRGIHIR DLMGDELFAK NEPYMRAALN GERQRFERTL TKADGSIGYT WAHYIPDIAN GQVRGFFVLV SDITELKLTQ LQLEQRTKEA EAANRAKSEF LANMSHEIRT PMNAILGLTR LVLETELDPR QRDFLLKVYN ASQALMEILN DILDYSKIEA GRVEIEQLPI SVEEVVRNTM GLFRAKIEEK GLATIMELAS SLPAVLQGDP MRLSQVLNNL VGNAVKFTES GEIRIMVEQI QEDCRTVTLC FSVQDTGIGL DKDETARLFQ AFTQADSTIS RKYGGTGLGL TICQRLVGLM GGSISVSSLK GVGSTFSFVI QMGKVPPGTQ AKKLHAFADG AMGTPDSLAV LSAHQKKLEL NRLRVLLVED NRINQEVAAE ILQQYGAQVT LADHGAAALE LLTGPGFDVV LMDLHMPVMD GFEATRKIRE LYDSATLPVI AMTAAVLQDD RERCTAAGMV DFVAKPINPL ELVTVLKRFQ KTSSPSSVPH EAAISPFEPS DPDSALPSLD VATALRRMGG HSELLNSLLK SFAKEHGLSA DELKALLSEG KTDDALHLAH NIKGVSGTVG AVRLMQAAAA LEQQLRSDPR QADLDLFTRE LELGLSAINR YLLSQERTVT APGGDHTPLD YEKLHPLLQE LTTYLREQEL APEQLLQQIV KLSAGTDSPL LANLLRQLDR FDHAGALETV QQLIAGLTEQ PHQPR
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