| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1971 |
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| Symbol | |
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| ID | 6366477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 2093846 |
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| End bp | 2096161 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642677383 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001952207 |
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| Protein GI | 189425030 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2203] FOG: GAF domain
[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000984823 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAAT CTCCAACGTC TGATATGAAC CTGCTCAAAC AACAGCTTGA GTACCGCAAA
CGGCTGATGG ACAAGATTAA CGAAATCCAT TCAGCTGATA ATCTCAACAC TATCCTGCTT
CATATTAAAG ACAGTATTGC AGCCCTGTTT ACTGCCCAGC GTATCACGAT CTATCTGGCT
GATGCAAAAC GCAATCTTTT GATATCAAAG GTTTTGTCCG GCACGGAGGT CAAGCAGATC
GTGGTACCGA TCTCTGATGC CAGTCTTGCT GGATACTGTG CCCTGTCCGG GACGGTACTG
AATATCAAAG ACGCCTATAA TGATCATGAA CTGAAGATGA TCAGCTCCAA TCTCAAGTTT
GACCACTCGT GGGATCAAAA AACCGGCTTT GTGACCAAAC AGGTTCTCTG TGTGCCGATG
AAGTTTCAGC GCACGCTGAT CGGTGTGATT CAAATCATCA ATAAACAGAA CGGTACCCCC
TTTGACGACA CAGATATCAC CTATGCCCTG GAACTGGGGA CATCCCTTTC AATTGCCATT
CACAATATCT ACCGCTTGCA GGTGACCACC AAGATCATTC GCCAGCGTAG CCGCTACAAC
TATCTGCTGG ATCGAAATAT TCTGGATGAC AAATCAATTG AAAAGGCGTC CGTCCACCCG
GATGTTGCCA AATTCGGTCT CGATGCTGTC CTGATGCGCG AATACAAAGT TCCCAGGGAA
GAGATGGCCA AAGCCCTGTC GCTTTTCTTT GGCACCGAGT TCATTAAATA CGAACCTGCA
GCTCCCGCCA TGGAAGAAGA ACTGCTAAAG CGGATCAGGC CGGATCGTTT GATGAAAGAG
TGGTGGGTAC CGTACAAGGT CGAGAACGGT GTACTGTATA TCATCATGGA TGACCCGACT
GATCTGGGAC GTCAGGACAT GATCAAGTTT ATCTACCCGG AATACAAACG GATCAGCTAC
GTGGGCGCCT TCCGGGATGA TATTCAAAGC TACATCGGAC TGTTCTATAA CCGTGGAGCC
TCTCTGGGGT CAGGAGGCAG CATAGATGAG TTGATCAATA AGCTGGACGC AACTGATGAG
CCGGAGATCG AGCAGGAATC ATCAAAGGTC TCTGAACAGG ACAGCGTGAT TGTCCAACTG
GTAAACAAGA TCATCATTGA TGCAGTCCAG GGCAAAGTAT CCGATATTCA CATTGAACCG
TATCCCGGTA AAGAGGATGT CATTGTACGT ACCAGGATTG ATGGGCGCTG CAAGGTTTAC
CAGCGCATAC CATACAAATA TAAATACGCC ATCCCTTCGC GGATCAAGAT CATGTGCGGC
CTTGACATTT CGGAACGACG CAAACCTCAG GACGGCAAGA TTGACTTCAA AAAGTTCGGA
CCGCTCGATG TTGAGTTGCG GGTAGCCACC GTACCTACAG CCGGTCAGCT TGAAGATGTG
GTCATGCGGG TTTTGGCTTC AGGTGAGGCC GCCCTGCCCT ATGACAAACT GGGGCTCACT
GAGCGCAACA GCAAGGTCTT GATGGAATGC ATCAACCAGC CCTATGGCCT GGTATTGGTT
GTCGGCCCCA CCGGCTCCGG AAAGACCACC ACCCTGCACT CCGCTATTTC CGTTATCAAT
ACCCCTGAAA CCAAGATCTG GACTGCAGAA GATCCGGTGG AGATCACGCA ACGGGGCCTA
CGTCAGGTAC AGGTACATCC CAAGATCGGT TTTACCTTTG CCGCGGCCCT GCGTTCCTTC
CTGCGGGCCG ACCCTGATGT AATCATGGTG GGTGAGATGC GGGATCAGGA AACCGCCGAG
ATCGGTATTG AATCATCCTT GACCGGCCAC CTGGTCTTTT CCACCCTGCA CACCAACTCG
GCACCGGAGA CGGTTACCCG TCTGCTGGAT ATGGAACTGG ATCCATTCTC GTTCTCGGAC
GCCATTCTCT GTATTCTTGC CCAGCGTCTC TGCCGCCGGC TCTGTGACTG CAAGCAGGAG
TACCAGCCGG ATCGCAAAGA ACTTGAAGAT ATCATAATGG AATATGGGGT GGAGGCGTTC
AAGAAGACAG GCATTAACCC TGCCGATATC AGGCTTTGCA AGGCAACCGG TTGCCCTAAA
TGCGGTGATT CAGGCTACAA AGGCCGTCTG GGAATCCATG AGCTGCTACA GGGTACCGAT
GAGATGAAGA CCCTGATCAA GCGTAAATCA GAAATTGAAG CAATCCGCCA TCAGGCTATC
AATGATGGCA TGACCACCCT GAAACAGGAT GGAATTCTTA AATGTTTCAA AGGGCTGACT
GATCTGAAAG AGGTCAGAAA AGTCTGCATC AAATAA
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| Protein sequence | MDQSPTSDMN LLKQQLEYRK RLMDKINEIH SADNLNTILL HIKDSIAALF TAQRITIYLA
DAKRNLLISK VLSGTEVKQI VVPISDASLA GYCALSGTVL NIKDAYNDHE LKMISSNLKF
DHSWDQKTGF VTKQVLCVPM KFQRTLIGVI QIINKQNGTP FDDTDITYAL ELGTSLSIAI
HNIYRLQVTT KIIRQRSRYN YLLDRNILDD KSIEKASVHP DVAKFGLDAV LMREYKVPRE
EMAKALSLFF GTEFIKYEPA APAMEEELLK RIRPDRLMKE WWVPYKVENG VLYIIMDDPT
DLGRQDMIKF IYPEYKRISY VGAFRDDIQS YIGLFYNRGA SLGSGGSIDE LINKLDATDE
PEIEQESSKV SEQDSVIVQL VNKIIIDAVQ GKVSDIHIEP YPGKEDVIVR TRIDGRCKVY
QRIPYKYKYA IPSRIKIMCG LDISERRKPQ DGKIDFKKFG PLDVELRVAT VPTAGQLEDV
VMRVLASGEA ALPYDKLGLT ERNSKVLMEC INQPYGLVLV VGPTGSGKTT TLHSAISVIN
TPETKIWTAE DPVEITQRGL RQVQVHPKIG FTFAAALRSF LRADPDVIMV GEMRDQETAE
IGIESSLTGH LVFSTLHTNS APETVTRLLD MELDPFSFSD AILCILAQRL CRRLCDCKQE
YQPDRKELED IIMEYGVEAF KKTGINPADI RLCKATGCPK CGDSGYKGRL GIHELLQGTD
EMKTLIKRKS EIEAIRHQAI NDGMTTLKQD GILKCFKGLT DLKEVRKVCI K
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