| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1965 |
|---|
| Symbol | |
|---|
| ID | 6366260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2087328 |
|---|
| End bp | 2088140 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642677377 |
|---|
| Product | protein of unknown function DUF140 |
|---|
| Protein accession | YP_001952201 |
|---|
| Protein GI | 189425024 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTG AGACGAATGT ACTGTTCCCG GAACGCATCG GGGCCTTTGT ACTCCGTCGG
GGGCAGTTTT TTGTCACCAT TACACGACTC ATCCTGCAGT CACTGGTATC ATTGATCAGT
CCTCCCTCCC TTGGGAATCC TGCCATTCGC ATGGTATTAC TGAAGCAGCT CTATTTTACC
GGCCTTGAGG CTGCAAAAAT CATTGTGCTG GTTGCTGTTA TTCTCGGAAC CGTTATTGTC
AGTCAGGTGA TTGGCCTGGT TGGCGGTGGA AACGGCTCAT TAATCGGCAA AGTGCTGGTC
TGGGTTGTGT TTCTTGAGTT AGGTCCTCTT TTAACTGCAA TGATTGTTAT TGCTCGCAGT
GGCACTGCCA TTGCAGCCGA ACTGGGGGCT ATGAAAATCA ATGGTGAAAT TGCTGCGTTG
GAACGATTGG GAATCGATCC CGAACGGTAT CTGTTGTTAC CTCGCGTCAT AGGTGCTGCC
ACCTCCGTCA TGCTCCTTAC CATTTATTTT GTGCTGACTT CTTTTGTAGG TGGCTTTCTG
ATTGTCTCGT TTGGCCACCA TATATCGTAC GATCAGTTTA TTCAGGGGAT CGTTGCCTCA
CTTGGAATAC GAGAAGTGGT TGTCTTGATG GCAAAAGCAG CTGCATTTGG CCTGATTATC
CCGCTGATCT GCTGTAATGC CGGAATGTCT GTCGGCACCA GCGCCACGGA AATACCCCAG
GCTGCAACCA GGGCTGTCAT TACCAGTCTC TTTTCAATTT TTGTCCTTGA TGGGGTGATA
ACATATCTTG CCTCTCTGCT GGCTGTTGCC TGA
|
|---|
| Protein sequence | MTSETNVLFP ERIGAFVLRR GQFFVTITRL ILQSLVSLIS PPSLGNPAIR MVLLKQLYFT
GLEAAKIIVL VAVILGTVIV SQVIGLVGGG NGSLIGKVLV WVVFLELGPL LTAMIVIARS
GTAIAAELGA MKINGEIAAL ERLGIDPERY LLLPRVIGAA TSVMLLTIYF VLTSFVGGFL
IVSFGHHISY DQFIQGIVAS LGIREVVVLM AKAAAFGLII PLICCNAGMS VGTSATEIPQ
AATRAVITSL FSIFVLDGVI TYLASLLAVA
|
|---|
| |