Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1825 |
Symbol | |
ID | 6369239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 1945747 |
End bp | 1946970 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642677230 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001952061 |
Protein GI | 189424884 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.010235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGGAC AAAGGACAAG GGTCAAGATA CAAGAAGCTA TCACCATCGG TTCAGCCCGT TACCGGCAGG CCAACCTGGC CCTGTTTTGC GCCGGGTTTA TCACCTTTGT GACCCTGTAT GATATTCAGC CGCTGCTGCC TCTGTTTACC CGGGAATTCG GCATCTCCCC CGCCACCAGC AGCCTGACGC TTTCGATCAG TACCGCCACG CTGGCCATCG GCATGCTTTT TTCAGGCCTG ACCTCGGATG CGATCGGCCG TAAACCGGTC ATGGTGACGG CCCTGATCCT GACCTCGCTA CTGGCCATAG CAACCGCTTT TTCCACCACC CTGCCTTCTC TGCTCCTGAT CCGTTTTGCT CAAGGAGCAG TGCTGGCCGG TGTCCCCTCG GTTGCCATGG CCTATCTGGG TGAGGAGATG GATGCAAACG CCATCGCCTC TGCCATGGGT CTCTATATCA GCGGCAATGC CGTTGGCGGC ATGTCCGGCA GGGTGGTTAC CGCCATCATG GCCGATTACC TGCCCTGGCG CACGGCCATC GGTCTGACCG GCTGCATCAG CCTGGTGCTG GCGCTTTGCT TTATCAAACT GTTGCCAGCC TCAAGCCGTT TTCAGAAACG CAGCCTTGAT CTGCGTACCC TGCTCCCTTC CCTGCTGCAC CACCTGAAAG ATCCGGGCAT GCTCTGCCTG TTCGGGACGG CATTTCTCTG CATGGGCTGC TTTATCAGCC TCTACAACTA TATCGGCTTC CGCCTGCTGC TGGAACCGCA CTCCTTAAGC CAGTCAGTTA TCAGCCTGAT CTTTCTGATC TATTTCCTAG GTTCACTCAG CTCGGCCATG ATGGGTCGCC TGATACAGCG CTTTGGCCGC AGGTTTGTGG TCAGGGCCAC CATTGCTGCC ATGGCCTGCG GGATCCTGCT GACACTGTCC CAATCACTCA TCAGCATCAT CACTGGAATC GCCCTGTTTA CCTGCGGTTT TTTCGGGATT CACAGCATCG CCTCTGGCTG GGTCAGCCGC AGGGCAACCA GCTATCGCGC CCAGGCCTCA TCGTTGTATC TGTTTTCCTA CTACCTCGGT TCCAGCATTT CCGGCACACT GGGCGGTTAC TTTTGGGGCA GTTATGCCTG GTCCGGTGTT GCTGCCATGA TCTGCCTGTT ATTGCTGGCT GCCTTTGGCT GCACAGAACA GCTTAGTCGC AGATACACCG GACATGCTGC CTGA
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Protein sequence | MQGQRTRVKI QEAITIGSAR YRQANLALFC AGFITFVTLY DIQPLLPLFT REFGISPATS SLTLSISTAT LAIGMLFSGL TSDAIGRKPV MVTALILTSL LAIATAFSTT LPSLLLIRFA QGAVLAGVPS VAMAYLGEEM DANAIASAMG LYISGNAVGG MSGRVVTAIM ADYLPWRTAI GLTGCISLVL ALCFIKLLPA SSRFQKRSLD LRTLLPSLLH HLKDPGMLCL FGTAFLCMGC FISLYNYIGF RLLLEPHSLS QSVISLIFLI YFLGSLSSAM MGRLIQRFGR RFVVRATIAA MACGILLTLS QSLISIITGI ALFTCGFFGI HSIASGWVSR RATSYRAQAS SLYLFSYYLG SSISGTLGGY FWGSYAWSGV AAMICLLLLA AFGCTEQLSR RYTGHAA
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