| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1820 |
|---|
| Symbol | |
|---|
| ID | 6369135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 1940009 |
|---|
| End bp | 1941139 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642677225 |
|---|
| Product | sodium ion-translocating decarboxylase, beta subunit |
|---|
| Protein accession | YP_001952056 |
|---|
| Protein GI | 189424879 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACGC AACTTATTGA TTTGTTGAAT TTGCTGAAAG ATCAAACCGG CTTGGCGCAA
TTGACCTGGG GTAACCTGTT TATGATCGGT GTGGGGATCG TCATGATCTA TCTGGCCCTG
GTAAAAAAAT ATGAACCCTT TTTGCTGGTC GGGATCGGGT TTGCCTGTGT GGTCGCCAAT
GTGCCCGGTT CCGGCCTGAC CCAGCCAGGG GGCCTGTTCC ATTATGCCTA CCAGGGGGTT
GCCCTGCTGA TCGTCCCTCC GTTGATCTTT CTGGGGGTCG GCGCCATGAC CGATTTTGGT
CCCATGATCG CCAATCCATG GCTGGTTATT CTGGGAGCGG CTGCACATCT GGGGATTTTC
GTAGCCCTGA TCGGGGCAAA GCTGCTCGGT TTTTCACTGG CGGAAGCCGG AGCTATCGGT
ATTATCGGCG GTGCAGACGG TCCCATGGCG ATCTTTGTCA CCATGAAACT GGCACCCCAT
CTGCTGCCTC AGATCTCGGT GGCGGCTTAT TCCTATATGG CCCTGATGCC GTTGATTCAA
CCGCCGATCA TGAAACTGCT TACCACGAAA AAAGAACGCC GGATTATCAT GGCAAAGCCC
CGCCAAGTCA CCCGTCTGGA AAAAATTGCC TTTCCGATTA TCATTGCCGT GATCGTCAAT
CTGTTTTTCC CGCCCATCGC ACCGCTGATC ACCATGCTGA TGCTGGGTAA CCTGTTTCGG
GAATGCCTGC TGGTGGATCG TCTGGCCAAG ACCGCAGCCA ATGAGATCAT GAACATCATT
ACGATTGTGC TGACCGTGGC AATCGGTTCA ACCATGAATG CCGAGCAGTT TCTGACTTTC
AAGACCCTTG AGATTGTTGC CTTGGGGTTG GTGGCGTTTA TGTTTGGTAC TGCCTCAGGT
GTGGTGGCGG CCAAGATCAT GAACGTCATC AGTGGTGGCA AGATCAACCC GCTGGTCGGG
TCGGCCGGGA TCGCCTCAGT GCCGATTGCT GCCCGGGTCT CCCACATGGT GGCCAACCGG
GAAAACCCTC AGGTGTACCT GATCATGCAT GCCATGGGAC CGAACCTGGC CGGGGTGTTC
GGTACTGCCA TTTCAGGCGG AATCCTGCTG GCGCTGTTGG GGGTAAAATG A
|
|---|
| Protein sequence | MFTQLIDLLN LLKDQTGLAQ LTWGNLFMIG VGIVMIYLAL VKKYEPFLLV GIGFACVVAN
VPGSGLTQPG GLFHYAYQGV ALLIVPPLIF LGVGAMTDFG PMIANPWLVI LGAAAHLGIF
VALIGAKLLG FSLAEAGAIG IIGGADGPMA IFVTMKLAPH LLPQISVAAY SYMALMPLIQ
PPIMKLLTTK KERRIIMAKP RQVTRLEKIA FPIIIAVIVN LFFPPIAPLI TMLMLGNLFR
ECLLVDRLAK TAANEIMNII TIVLTVAIGS TMNAEQFLTF KTLEIVALGL VAFMFGTASG
VVAAKIMNVI SGGKINPLVG SAGIASVPIA ARVSHMVANR ENPQVYLIMH AMGPNLAGVF
GTAISGGILL ALLGVK
|
|---|
| |