| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1812 |
|---|
| Symbol | |
|---|
| ID | 6369003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1929461 |
|---|
| End bp | 1930681 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642677217 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_001952048 |
|---|
| Protein GI | 189424871 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.312909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGTT CCAGATTACA ATCTCAGCAC AGCGACCCCG ATCGTATTCT AATAAACACC
CCGCCTAACT CACGAACTAC TCAGGGTTCA AGAGAAGGAC AAGCTGCTGG CGACAGGATT
GTTCGCTATA ATCAGCTCTT GTTAAAAGCT GACACTGCCT ACTTGTCAGG AGATTACAGC
ACCGCGATTT CAGCCTATCA GGAAGCCTTA CGTCTTAGTC CCGACAACCA GCTGGTTTAT
CAAAAGCTTG GTGAAGCGTA TTTTTCAGCC GGAGAAGACG AAGAGGCATT GGCAACATTC
AAGACATATC TTAAAAAAAG CACGTCAACT TCAGCGCGAA TCCACTATGT CTCAGGAGTA
TTGCTGGAGC GTCAAGGCAA TATTGATGCG GCTTTAGATG AATACAATGC CGCGATGGCA
ATTGATCCAA TCCACAGCGG GGCTCGTCGA AGACGGGCTG ACATCTATAT AATACGGGGA
GAATTCAAAA AAGCGATCAA CGAGTACCAG ATATTACACG AAGCTTCACC GAACAGCCCG
ATTCTCTTAT ACAAGCTTTC CCGCGCCTAT GTAAAAGACA AGCAATTCGA TAAAGCTCTT
GAGGTATACA GGCAAGCCAT TAATCTTGAT GATGGTAATA TAGAAATTCA GCGTGAGTAT
GCTTTGCTGC TCAGACAACG TGGTCATTAC CATGAAGCTG AAAACGCCTA TTCTGCTATA
CTCGAAAAAC AGCCCGACGA TGAGGTCGCA CTTAACGGGA TCATATTTGT CTATGTTAAA
CAGAAGCAAT ATGAAGGCCT TACTTCTTTT CTGGAAAAGC AGCAAGGAAG GGACGCTAAC
AATCCAGATC ATCCTTACCG CCTGGGATTA ATTTATGAAT ATCGGCGTAT GTTCCAAGAG
GCGCTTGATG CCTACAAACG ATCTTTAGAC TTAAAGTCTT CAGCCAAAGC ATATCGAGCC
CTTGGTCGGG TTCTGCTCAA AGCTGGAAAA AAAGCAGAAG CAAAAGCAGC CCTTGAATCA
GCGCGAAAGA TAGACCCCAA GGCCCCTGAG GTGCGCAGCC TGTTAATGCA GCTTAAGGCT
GAAAACAGGG TGCAAAACCT AAAAAAACAC AAGAAAAAGA TATCAAAATC CAGGAAAAAG
AAGGGCAAAA CGAGAAAATC TACAACCAAA ACCAGAGAAA AACCTAAAAA AACTGTTAAA
ATGCAATCAA AAAAGCAGTA G
|
|---|
| Protein sequence | MESSRLQSQH SDPDRILINT PPNSRTTQGS REGQAAGDRI VRYNQLLLKA DTAYLSGDYS
TAISAYQEAL RLSPDNQLVY QKLGEAYFSA GEDEEALATF KTYLKKSTST SARIHYVSGV
LLERQGNIDA ALDEYNAAMA IDPIHSGARR RRADIYIIRG EFKKAINEYQ ILHEASPNSP
ILLYKLSRAY VKDKQFDKAL EVYRQAINLD DGNIEIQREY ALLLRQRGHY HEAENAYSAI
LEKQPDDEVA LNGIIFVYVK QKQYEGLTSF LEKQQGRDAN NPDHPYRLGL IYEYRRMFQE
ALDAYKRSLD LKSSAKAYRA LGRVLLKAGK KAEAKAALES ARKIDPKAPE VRSLLMQLKA
ENRVQNLKKH KKKISKSRKK KGKTRKSTTK TREKPKKTVK MQSKKQ
|
|---|
| |