Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1722 |
Symbol | |
ID | 6369227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1827347 |
End bp | 1830370 |
Gene Length | 3024 bp |
Protein Length | 1007 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642677127 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001951958 |
Protein GI | 189424781 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.608863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGGT TGCGCTCATT GCCCATACAT ATGCTGATTC TGCTGCTGCT CATGCTAGTG GCGCTGCCTT CCATCGGCAT TATTATACAA TCCGGGCTTC AGGTGAGAGA AGCTACCAGC AATGATGCCG GCAAGGCATC AAGCTACCTG CTTAACAGCG TTGTTGCAGA ATTACAGACC AAGGTTGACA GTTCCCGTCA GTTGTTGGAA ATGCTGGCAC TTTTCCCGGA AGTGCGCCAA AAAAACAGTG CGGCCACCAG CCGTTTACTG GCTGACCTGC TTGCCAGATA TCCTCTGTAT ACCAATATCA TTATTGTTGA CCGCTCCGGA GTGCCCTGGG CCAGCGCGAT ACCGGATAAC AGAAAAATAT CCTATGCTGA TCGTAAAATT TTTAAGGATG CCGTAGCAAC AGGGCACTTT TCACCCGGTG AATATACTAT CGGCAAGGCT TCACAGAAGC CGATCCTCAA CTTTGGTTTG CCGATCAAGG ATCAACAGTC TGTTGTTACC AGTGTGATCC TGATCGGAAT CAATCTTGAA AAGATCGGCA GTGTATTGAA TGCACACAGG CTTCCTGCCG AAACCTCTTT TGGCATATTC GATAGCAAAG GGGTTTTTCT CTATAGAACA GCCCGTGCCA ATGAGTTTAT TGGAAAACAT GATCAACCGC ATCTGTTCGA ACAGATGAAG AATGGTCCTG AAGAAGGAAT TATCGATATT GTCTCCAATG ACGGTGTTCA CCGTATGGCG GCATACCGCA AAATCCGGCT GTCTGATGAT CAGCCCCCCT ATGCCTATAT CCGGGGAGGG ATCCCGCTTG ATCATATTGT TAACAAGGCA AATAGCAGCA TAGCAAAAAA TCTGACCATT CTGTCAGGCA TGCTTTTGCT CGGCTTCACA ATAAGCCTGC TGATCAGCAG ACGTTGCATT GTCAAACGGA TCTCGGCGCT GCATGATGCC TCCCAGCGAC TGGCCGCCGG TGATTACCGG GTAAATGTTG ACAAAGAGGT TGAGGGGGGA GAGCTGGGAA AGCTCGCAGA GGCCTTCAAC ACCATGGCTG GCAAACTGAT TCAGAGAGAG AAGGCGTTGG CTGCCAGTGA ACGCTTTCTG AATACAGTCA TCGACACGGA ACCGGAGTGT GTCAAACTGC TTGATGCCGA TTGCAACCTG CTGATGATGA ACCGGGCCGG GCTTGGGATA ATAGAGGCTG ACTCTTTTGA ACAGGTACAA GGGCAATGTG TCTGTTCCTT GATTGCACCG CCTTACCAAG CCGCTTTTCG CGAACTGACC AGACAGGTTT TTCTGGGAAT TCAGGGACGG CTTGAATTTG AAGCCATCGG GCTTAAAGGC CGCCATGTCT GGCTGGAAAC CCATGCGGTG CCGTTTCACG ATGATCAGGG GAATATTACC TCCCTGCTGG GGGTTACCCG TAATATTTCC GAGCGGAAAC AGTTTGAGCA GGCAATCAAG GCTGAACGTG ATCACTTTCA GGCCTTGTTT GAAAATGACG GCTCGGCCCA CGTGATTGTT TCATCAGATC GCCGGATTGT GAAGGTTAAC CGGCAGTTCT GTGAGATGTT CGGGTATGAC GAAGCCGAAC TGCTGGGGGA ATCAACGCTC ATACTGCATG TTGACCAGAA ACATTATGAC GAGTGGGCTC CCAACTTCCG GCAGGCGTTG GATAGCAAGG AACATTTCAG CGCCGAATTT CCCTGGCGTC GCAAGGATAC CAGCATATTC TGGTGCGTCT TTAACGGGGT CAGGCTGGAG CTTGTTTCCG GTGATATCGT TGCCGTCTGG ACGGTGATTG ATATTACCGC ACGTAAACAG GCGGAACAGC AACTGCGATC AGCCAAGGAG GCGGCTGAGG CGGCGAACTC CGCCAAGAGC GCATTTCTTG CCAACATGAG CCATGAAATC CGTACCCCCA TGAACGGGAT TATCGGCATG ACGCACCTGC TGCAGACAAC CGTCATAACG CCTGAGCAGG AGCATTACCT CGAAAATATT GAAAATTCGG CGAACAGTCT GACGACCCTG ATCAGTGACA TCCTTGACCT GTCGAAGATC GAGTCCGGCA AACTGGAGCT GGAATACAGC GACTTTTCCC TGCGCCGTTG CATCCGGGAA CTGCTTGCCA GCCAACAGTT TCAGATTCAG CATAAAGAAC TTATGGTTCA GACCGACATA GCGGATAACG TGCCGGATAT CCTGCGGGGC GATCAGTTGC GTACTCGGCA GATCCTGTTG AACCTGATCG GTAATGCCAT AAAATTTACG GAACAGGGCT CCATTGCCAT TACTGCCCGC TTGGTAGCCC AACAGGATGA CCTTGCTTTG ATCCGGCTCA GCATTTCAGA TACCGGTATC GGTATGTCGC CACAGCAGGT TGACCGGATC TTTGCTCCTT TTGAACAGGC TGATAACTCA ATTACCAGAA AATATGGCGG GAGCGGTTTA GGGTTGGCAA TCTGCCAGCG TTTGATTGAG TTGATGGGAG GCCGGATCTG GGCTGAAAGC ACAGAAGGGA ACGGCAGCAG CTTCCATATT GAGATGCGTT TTTTTATTCC GGAATCTTCA GCAATCCAAT CATTTGCAGA CAACGTGTCG CTGTCAGAAC CAGTTACCCG GCAAAACCTG AATATTCTGC TTGCAGAGGA TAACAAGGTT AACGCTGAGT TTATTGTAAA AATACTGGGT AGAACCGGAC ACAGGATTAC TGCGGTGGAG AATGGTCAGC AGGCGCTGGA GCTGTTACAG CACCAGCGAT TTGATTGTGT CCTGATGGAT ATACAGATGC CGGTGTTGGG AGGCGACGCT GCTACCCAAA TCATCCGGGA ACAGGAGCTT GGTACAGGGG AGCATATCCC GATCATCGCA CTCACCGCCC ATGCCATGAC CGATGAACGG ATACGGTTAC TGAGTCAGGG GTTTGATGCC CATGTATCCA AGCCGGTGGA TATCAGTTTT CTCGTTTCCG AGCTGGAACG TGTGACATCT GCTCAACTCA ACCAGCCACG ATAG
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Protein sequence | MKWLRSLPIH MLILLLLMLV ALPSIGIIIQ SGLQVREATS NDAGKASSYL LNSVVAELQT KVDSSRQLLE MLALFPEVRQ KNSAATSRLL ADLLARYPLY TNIIIVDRSG VPWASAIPDN RKISYADRKI FKDAVATGHF SPGEYTIGKA SQKPILNFGL PIKDQQSVVT SVILIGINLE KIGSVLNAHR LPAETSFGIF DSKGVFLYRT ARANEFIGKH DQPHLFEQMK NGPEEGIIDI VSNDGVHRMA AYRKIRLSDD QPPYAYIRGG IPLDHIVNKA NSSIAKNLTI LSGMLLLGFT ISLLISRRCI VKRISALHDA SQRLAAGDYR VNVDKEVEGG ELGKLAEAFN TMAGKLIQRE KALAASERFL NTVIDTEPEC VKLLDADCNL LMMNRAGLGI IEADSFEQVQ GQCVCSLIAP PYQAAFRELT RQVFLGIQGR LEFEAIGLKG RHVWLETHAV PFHDDQGNIT SLLGVTRNIS ERKQFEQAIK AERDHFQALF ENDGSAHVIV SSDRRIVKVN RQFCEMFGYD EAELLGESTL ILHVDQKHYD EWAPNFRQAL DSKEHFSAEF PWRRKDTSIF WCVFNGVRLE LVSGDIVAVW TVIDITARKQ AEQQLRSAKE AAEAANSAKS AFLANMSHEI RTPMNGIIGM THLLQTTVIT PEQEHYLENI ENSANSLTTL ISDILDLSKI ESGKLELEYS DFSLRRCIRE LLASQQFQIQ HKELMVQTDI ADNVPDILRG DQLRTRQILL NLIGNAIKFT EQGSIAITAR LVAQQDDLAL IRLSISDTGI GMSPQQVDRI FAPFEQADNS ITRKYGGSGL GLAICQRLIE LMGGRIWAES TEGNGSSFHI EMRFFIPESS AIQSFADNVS LSEPVTRQNL NILLAEDNKV NAEFIVKILG RTGHRITAVE NGQQALELLQ HQRFDCVLMD IQMPVLGGDA ATQIIREQEL GTGEHIPIIA LTAHAMTDER IRLLSQGFDA HVSKPVDISF LVSELERVTS AQLNQPR
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