| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1644 |
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| Symbol | |
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| ID | 6368426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1750327 |
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| End bp | 1753002 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642677048 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_001951880 |
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| Protein GI | 189424703 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGTA TACTTAACAT GAAGCCTGTG GTTGCCTTTG CGCTTTGTAC TATGCTGACA
GTCGGTATGG GGGTCGGGGC AGGAACGGCC GCAACTGATA CGGCACAGAG TGCTTCAGCT
CCGGTAACGA TTCAGTCTCT GCAGATGAAA GGGGATGGCG CCGGCTCAGA GCTGATCATT
GCTGCCTCAA TGCCTCCAAC CTATACCAGC TATAAAACAT CTGCTCCACA GCGCTTGGTC
GTAGATTTTT CTCAGGCGAT ACCGGTTGAC TCTCTTTCAG ATACTAATTT TGATAAGGGG
CCGGTAAAAG GGGTGACCAT CAAGCGCTTT GATACTGACG CTGGTGTGTT AACCCGCATG
GAAATATTCC TTACTCAGGA TGTCGACCCG GTTATTACTC CTTCCGTGGA TAAAATAGGA
GAGTTAAGGA TTAGTTTTCC CGGTTTTAAG CCAGATGTTA CAGCACCCTC TGCAAAACAA
GAGTCAACAA CGGTGGCACA GCCAGAGGCT GCCCTCGCGC CAGTGCTGTC TAAGCCTGAA
CCCGCAAAAG AAGTAGCACC AAGTACTACT CATGAAGCCG TTATGCCGGT GATAACTGAT
GTTGTTGCTC AGGCAGGTGG CATTGCCATT GTGACCCAGA CTCCAATTAC AGACTATAAA
ACGTTCCGTT TGAATAAGCC TGAACGGGTT GTCGTAGATA TTCTCAATGC AAAGTTGAAT
ATGCCTAACA AACTGGTACA ACTGAATGTT GCTGGAGTTT CCACAGCTCG TGTCGGTAGT
TACCCGGATA AAGTCAGGGT TGTATTTGAT GCAATTAACG GTGCGTTGCC TGAAGCTTCG
TTTGACAAGA CTCAGACTGG ACTCATGGTG CTGTTTGCTG CCCAAAGCAA TGAGAAACAA
CAACCTGCAG TTGCTGTGGT CACGCAGCCA GAAAAACGTA ACGTCGCCAT TCCAGTCAAA
GAACAGGTAA CATCAGTTCC AAAAGAGGTC GCTTCTAATG CTTCTGCCCA GATGGCAAGT
ATTGACTTTC AGGTCCTGGG AGATACAAGC CGGGTAACGG TAAAGGTGGT CGGATCACCA
CAAATTGAAG AGCCTGTTAA AAGCTCTGGT TCAGTTTCCT TCAGAATAAA GAATGCGCAA
CTGTCGCGCG ATCTTCAACG TTCACTTGAA GCGCGTGAGT TTGTCTCGCC GGTTCTGCGG
ATTACTCCGG TACAGGTGAA GACAAAGACC GGCAATGACA TTCTTGTCAG AGTTGCCCTT
AAAATGGACA GTGGATACGA GTTACGACGT GAGGCTGATC TAGTCTATTT AGATATCAAA
CATCCTGCAA CAATGGCTAA ATCAATAGAA ACTGCAAAGG GAACAGCAAC CCAGAAGGCT
TCGTCAGCTA ATGGTTCAAG CGCTCCCAAT GCTGGTGACC AGATTGAAAA AGTGGCTGAG
CAGGCAGCCC CTGTGTCAGG TAAAGCTCGA TACAATGGCC GTAAAGTTAC GCTTGAATTT
GCTGATGCAG AAGTGCGGAA GATATTTCAG CTGTTGTCTG AAGTAAGCAA CAAGAACTTT
GTTTTGGGTG ATGAAGTAAC CGGTACCATC AGCCTCAAAT TGGTCAATGT GCCTTGGGAC
CAAGCACTTG ATATTATTCT TGATACCAAG GGCCTTGATA AACGAGAGGA AGGTACCATT
GTGCTCATCC GAGGCAAGGG TAAGTTTAAA TCATTGCTTG ACGAAGAGAT GGAAATACGC
AAGTCCACCT TGAAGAGTGA GCCACTTCAA ACCGCGATGT TCGATGTTAA CTATGCAGAC
CTTGCTAGTA TTGTGTCTCA GTTTAATTCT ATCAAGACTG ACCGTGGCTT GATTACACAA
GACCAGCGTA CCAATAAAGT AATTGTTAAA GATGTTAAGT CTGCTGTTGA TGATATGCGC
AAAATTCTTG CCAGTCTTGA TGTACCTGAA AAGCAGGTTA TGATTGAAGC CCGTATTGTA
GAGGCATCAT CGACATTTAC CCAATCCTTG GGGGTCAACT GGGGTATCCA TTATCGCGAC
GGTTCAGCAA GTATTGCCGG TATTAACTCA ATGGATACAA ATTTTGGGGG TCTTGCCTCA
ACTGCGCCTA CTTCAAGTGG AGTGAGTGGA TCGCCAGGCG CTGCTGCAGG CATTTCGTTT
GGTACACTCA GCAGCAACAT CAAGCTTGAT CTGCGCCTGA ATGCTGCTGT CAGTGCCGGT
CTGGTAAGAA TTGTCTCCAC TCCCCGTGTA GCAACCCTTA ACCATAAATC AGCAAAAATT
ACGCAAGGGC AGCAGATTCC GTACACCGCT TCTACTTCAG ATAAAATTGA AACCAAGTTT
GTTGAGGCTG CTCTCGCTCT TGAAGTAACC CCGCATATCA ACCCGAACGG TACTGTTGTG
ATGAAGATTG ACGCTAAAAA CGACTCTCCA GGCTCAACAG GGAACCCACC TGCAATTAAC
AAAAAACAGG CTACTACTGA AATGATGCTG CGAGACGGAG AGACAACGGT CATTGGTGGT
ATCTTTGTGG AGTCCGAGTC AAACAATGAT GACGGCGTAC CCTTTTTAGC CGACGTGCCA
TGGCTTGGCG GGCTGTTTAA GTCTAATGAA ACAAAACGTA ACCGTAACGA GTTACTGATT
TTTATTACGC CGAGAATAAT TAACTCTAAT TCCTAG
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| Protein sequence | MKCILNMKPV VAFALCTMLT VGMGVGAGTA ATDTAQSASA PVTIQSLQMK GDGAGSELII
AASMPPTYTS YKTSAPQRLV VDFSQAIPVD SLSDTNFDKG PVKGVTIKRF DTDAGVLTRM
EIFLTQDVDP VITPSVDKIG ELRISFPGFK PDVTAPSAKQ ESTTVAQPEA ALAPVLSKPE
PAKEVAPSTT HEAVMPVITD VVAQAGGIAI VTQTPITDYK TFRLNKPERV VVDILNAKLN
MPNKLVQLNV AGVSTARVGS YPDKVRVVFD AINGALPEAS FDKTQTGLMV LFAAQSNEKQ
QPAVAVVTQP EKRNVAIPVK EQVTSVPKEV ASNASAQMAS IDFQVLGDTS RVTVKVVGSP
QIEEPVKSSG SVSFRIKNAQ LSRDLQRSLE AREFVSPVLR ITPVQVKTKT GNDILVRVAL
KMDSGYELRR EADLVYLDIK HPATMAKSIE TAKGTATQKA SSANGSSAPN AGDQIEKVAE
QAAPVSGKAR YNGRKVTLEF ADAEVRKIFQ LLSEVSNKNF VLGDEVTGTI SLKLVNVPWD
QALDIILDTK GLDKREEGTI VLIRGKGKFK SLLDEEMEIR KSTLKSEPLQ TAMFDVNYAD
LASIVSQFNS IKTDRGLITQ DQRTNKVIVK DVKSAVDDMR KILASLDVPE KQVMIEARIV
EASSTFTQSL GVNWGIHYRD GSASIAGINS MDTNFGGLAS TAPTSSGVSG SPGAAAGISF
GTLSSNIKLD LRLNAAVSAG LVRIVSTPRV ATLNHKSAKI TQGQQIPYTA STSDKIETKF
VEAALALEVT PHINPNGTVV MKIDAKNDSP GSTGNPPAIN KKQATTEMML RDGETTVIGG
IFVESESNND DGVPFLADVP WLGGLFKSNE TKRNRNELLI FITPRIINSN S
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