| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1638 |
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| Symbol | |
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| ID | 6368420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1745198 |
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| End bp | 1747132 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642677042 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001951874 |
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| Protein GI | 189424697 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACCA AACGTCTTGG AGAACTGTTG ATTGAACAGG GCCTCATCAG CCAGGAACAA
CTGGATGAGG CACTTGAAAT GCAGAAAATG TTTCCGGATC AGACCGTAGG GCAGCTGTTA
TGTCGTCTGG GGTACATCCG GGAGAGTGAC CTGTCATTGG TACTGGACCA GAAGAACAAG
CGCCGTAAAC TGGCCGATAT TCTGTTGAAG GAAGGTATGA TTGACCAGCA AAAGCTTTCC
CAGGCCCGTG AGCTGAGTCG CCAGAATGAT ATCCCGCTTG AACGGGCTTT GTTGAAGCTG
CGCTTTATTG ATGAAGAACA GCTTGCCCGG TCTGTTGCAG CACAATTTGA CCTGCCCTAT
GTAGAAATTC ATTCCATCAG CCTGGATCCT GATCTGTCTC GCTATATCAG CTCGGTATAT
GCCCAGAAAC ATATGCTGGT GCCAATTTCA ATGATCGGCA ATACCTTGAC GCTGGCCATG
GCTCAACCGT TACGGCATCA TGATATCAGG CAGCTTGAGG ATAATATCCG TCTTAAGATT
ATCTCGGTAA TCGCCTCTGA AGCCAGTGTC CAGCGTGCCC TCAAAATGCT CTATAGAGTC
GATCTCTCAT CCAGCAGCAG CGCCATGGAC GAGGTAAATC TCGATCTGGT GCCGGACAGC
ATTTCCGAGC TGTTGAACAA AACCTCGGCT ATCGATGAAC CGGAGGTTGA GGAGGAGGTT
CGCAAGGTAA CGGAAAAAGA CTCCGTTATT GTCAAGCTGG TTAACAAGAT TATTTATGAC
GCCTATATGA AGAAGGCGTC AGATATCCAT ATTGAACCAT ATCCAGGTAA GCGTGATGTA
ACGGTCCGTA TCAGGATTGA CGGACAATGC CTCGTCTACC AGAAAATACC CTACAAATAT
AAGTTTGCTA TTCCTTCACG GATCAAGATC ATGGCAGATC TTGATATTGC TGACCGCCGC
AGGCCGCAGG ATGGCAAGAT CGATTTTAAA AAGTTCGGAC CTCTTGATAT TGAGCTGCGG
GTTGCCACGA TGCCCACGGT GGGACAGTTG GAGGATGTCG TCATTCGTAT CCTGACCAGC
GGTGAGCCGA TATCGTTTAA TCAGTTGGGC CTGACCGAGC GCAATCAACA GGTTTTTGAG
CGTTGTCTGC AAAGCCCGTA TGGTCTGGTG CTGGTGGTTG GGCCTACCGG CTCTGGTAAG
ACCACGACAC TGCATTCAGG GTTGGCCATG ATCAACTCGT CAAACCGCAA AATCTGGACC
GCGGAAGATC CTGTTGAGAT CACTCAGATC GGTTTGCGTC AGGTCCAGAT CAACCCCAAA
ATAGGTTTTA CCTTTGCCTC TGCGTTGCGT TCGTTTCTGC GTCTTGACCC GGATGTAATC
ATGGTTGGTG AGATGCGGGA TGAAGAAACA GCAGGCATTG CGGTGGAAGC CTCGTTAACC
GGCCATCTTG TTTTTTCTAC TCTACATACC AACTCTGCCC CTGAAACCGT TTCCCGCCTG
TTGGAGATCG GGTTGGATCC CTACAGCTTT TCAGATTCAT TGCTGTGTGT CTTGGCACAG
CGCCTGGCCC GGCGATTGTG TTCGCATTGC AAGGAAGTGT ACGTGCCGAC TCAAGCAGAG
TTGGATGAGT TGTTGGAAGA GTATGGGCGT GACGCCTTTG CTGGTACCGG TATTGATCTG
AAGAGTATTA CCTTGGCGCG AGCACATGGT TGTGAACAGT GCGGACAGTC CGGCTATCAT
GGCCGATTGG GGATTCACGA AGTTCTGGAT GCCTCTGATC ATCTTAAATA TCTGATTAAG
CGACGAGCCG ATACTGATGA CATTCGTCTC CAGGCCATAC AGGACGGCAT GACCAGTCTT
AAGCAGGATG GTATTTTGAA AGTTTTGCAA GGTTTGACAG ATATTCATGA GGTTAGGAGG
GTTTGCATCA AGTAA
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| Protein sequence | MITKRLGELL IEQGLISQEQ LDEALEMQKM FPDQTVGQLL CRLGYIRESD LSLVLDQKNK
RRKLADILLK EGMIDQQKLS QARELSRQND IPLERALLKL RFIDEEQLAR SVAAQFDLPY
VEIHSISLDP DLSRYISSVY AQKHMLVPIS MIGNTLTLAM AQPLRHHDIR QLEDNIRLKI
ISVIASEASV QRALKMLYRV DLSSSSSAMD EVNLDLVPDS ISELLNKTSA IDEPEVEEEV
RKVTEKDSVI VKLVNKIIYD AYMKKASDIH IEPYPGKRDV TVRIRIDGQC LVYQKIPYKY
KFAIPSRIKI MADLDIADRR RPQDGKIDFK KFGPLDIELR VATMPTVGQL EDVVIRILTS
GEPISFNQLG LTERNQQVFE RCLQSPYGLV LVVGPTGSGK TTTLHSGLAM INSSNRKIWT
AEDPVEITQI GLRQVQINPK IGFTFASALR SFLRLDPDVI MVGEMRDEET AGIAVEASLT
GHLVFSTLHT NSAPETVSRL LEIGLDPYSF SDSLLCVLAQ RLARRLCSHC KEVYVPTQAE
LDELLEEYGR DAFAGTGIDL KSITLARAHG CEQCGQSGYH GRLGIHEVLD ASDHLKYLIK
RRADTDDIRL QAIQDGMTSL KQDGILKVLQ GLTDIHEVRR VCIK
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