| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1631 |
|---|
| Symbol | |
|---|
| ID | 6368394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1735168 |
|---|
| End bp | 1736733 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642677035 |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_001951867 |
|---|
| Protein GI | 189424690 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG CTGCAGAAAA GAATATCAAT AAATGGCTGA TTACCATCAC GGTGATGCTC
CCCACAGTCA TGGAGATCAT CGACACCTCG GTGGCCAACG TGGCCTTGCC ACACATGCAG
GGTAGCCTGA ATGCCGGGAC CGATGAGGTA ACCTGGGTTC TCACCTCCTA CCTGGTCAGT
AATGCCGTAG TGTTGCCAAT GACCGGCTGG CTCTCCCGCA TGTTTGGCCG CAAACGGTTC
CTGATGACCT GTATCATCTT GTTTACCCTG GCATCACTGC TCTGCGGTGC AGCTCCCAAC
CTGGCATCAC TGATCTTCTT CCGGGTAGTT CAGGGGGCTG CAGGCGGTGC ATTAATTCCG
ATCAGTCAGG CCATCCTGAT GGAAACCTTC CCGCCGCAAC AGCAGGGTAT GGCCATGGCC
ATTTTCGGCA TTGGTGCCAT GTTCGGCCCG ATCGTGGGCC CGGCCTTGGG GGGCTGGATC
ACCGACAATC TCAACTGGCG CTGGATCTTC TATATCAATC TGCCGATCGG TCTGATTGCA
ATCGTCATGT GCAGCCTGTT TATTTTTGAT CCTGAGTATC TGCGGCGAAA GTCCCGTGAA
GTGCTTCGGA TTGACTACTG GGGGCTGTTT CTGTTGACCA CCAGCATGGG GGCATTGCAG
GTGGTACTTG ACAAAGGACA GCAGGAGGAC TGGTTCAACT CTTCTTTTAT TCTCACCTTC
AGCGTGATTA CCGTTGTCTC GCTGCTGGCC TTGATCTGGG TGGAGTTAAC CCATCCACAC
CCGATCGTGA ATCTGCGACT GTTTAAGAAC ATCTCCTTTT CAGCCGGCAA CCTGATTATG
TTTGTCGTGG GTTTCTGCCT CTACAGCTCA ATCATGCTGA TCCCGCTGTT TCTACAGACC
CTGGTTGGCT ACTCGGCGAC CGATGCAGGT TTGGTTATGG CACCGGGCGG TGTGGCGACC
CTGCTTACCA TGCCGTTTGT GGGGGCCATG CTGGGCAAAC GGGATGGACG TAAGATCGTT
CTGACGGGAC TACTGATTGG AGCAACCGCC ATGTTTATCA TGCAGGGACT CAGTCTGGAG
GCCTCCTACT GGTCCTTTGT CTGGCCCCGC ATCGTTCTGG GAGTCGGCCT TGCCATGATC
TTCGTACCGC TGACCACGGT CACCCTTTCA GCAATCCCCC GGCAGGAAAT GGGCAATGCC
ACCGGTGTCT TCAACCTGCT GCGTAATATC GGCGGCAGTG TCGGCATCGC TATTGCCGCC
ACCTTGCTGG CGCGGTTCTC ACAGTTTTAT CAAACCAGTC TCGTTCCCCA TATCAGCCAG
TACAATCCCC TTTTTCAGAT GCGATTCAAC ACGCTCAAGC AGGCCCTGAT CGCCAAGGGG
ATGCAGGCAA CCCAGGCTGA CCAGACAGCC ATGGGCATGC TCTACGGCAT GGTACGCAAA
CAGGCTGCCG CCCTGGCCTA TAACCGGATA TTCTTCATCA TCGGCCTGGC CTTTCTTGCC
ATTATTCCAC TCCTGCTGTT GCTCAAACGT CCCAAACACC AGTCCGGACC AATGGAGCTG
CATTGA
|
|---|
| Protein sequence | MTSAAEKNIN KWLITITVML PTVMEIIDTS VANVALPHMQ GSLNAGTDEV TWVLTSYLVS
NAVVLPMTGW LSRMFGRKRF LMTCIILFTL ASLLCGAAPN LASLIFFRVV QGAAGGALIP
ISQAILMETF PPQQQGMAMA IFGIGAMFGP IVGPALGGWI TDNLNWRWIF YINLPIGLIA
IVMCSLFIFD PEYLRRKSRE VLRIDYWGLF LLTTSMGALQ VVLDKGQQED WFNSSFILTF
SVITVVSLLA LIWVELTHPH PIVNLRLFKN ISFSAGNLIM FVVGFCLYSS IMLIPLFLQT
LVGYSATDAG LVMAPGGVAT LLTMPFVGAM LGKRDGRKIV LTGLLIGATA MFIMQGLSLE
ASYWSFVWPR IVLGVGLAMI FVPLTTVTLS AIPRQEMGNA TGVFNLLRNI GGSVGIAIAA
TLLARFSQFY QTSLVPHISQ YNPLFQMRFN TLKQALIAKG MQATQADQTA MGMLYGMVRK
QAAALAYNRI FFIIGLAFLA IIPLLLLLKR PKHQSGPMEL H
|
|---|
| |