Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1550 |
Symbol | |
ID | 6367357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1641619 |
End bp | 1644606 |
Gene Length | 2988 bp |
Protein Length | 995 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642676948 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001951786 |
Protein GI | 189424609 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTTTTT CAACCATACA AAGTCGTCTG ATAGTCAGTA TCTCACTGTT TCTGCTACTA GTCATGAGCG GAGCTGCCAT TGGTATTTAC CTGTATTTTA AGCAGCAAAC CGTCAGTCTG GTCCAGGCAC AGCAGTTTGC CATGGTCTCC ACCCTCGCTT CCGGACTGGA TGACAAACTC AGCTCGGCTC AACTGGCCTT GATTCGTTCC GCTGGCAGCG CCCCCCGGGA TCTGTTCAAT AATCCGGAAA AAGCACAGGC ATGGCTGAAC AGCCGTACCG GCACCAAAAG TATCTTCAGT GGCGGCCTGT TTTTGTTTAC GCCAGAAGGA ATGCTGCTGG TGGAGAACCC GCGACTGCCC AGCCGCCGCG GTAGGGATTT CTCCTTTCGT GAATACTACC TGAAAACCGT TGCCAGCGGC AAACCGGTGA TATCCAATCC TTATCCCTCC TCAATACATG GACGTCCCAG CATCATGATG ACCGTTCCGC TCTTTCACGC CGACGGACGG CTATCGGGGA TCATGGGCGG GGCACTGGAC CTGTTGGACA AAGACAGCTT TCTTAATGTC CTGACCAGAA CCAGGGTTGG CAAGAGTGGC TATTTTTACC TGTATGCGCA GGACCGCACC ATGATAGCTC ATCCAGACCC AAGCCGGATC ATGCAGCAGG ATGTGCTGCC CGGTATGAAT CGTCTGTTTG ACAAGGCGTT GGAGGGCTTT GAAGGGAGCG GCGAGACGGT TAACAGTAAA GGGGTGCGGG CACTCTCTTC CTTTAAGCGG CTCAAGAGTG CCGGCTGGAT TTTGGCTGCT AATTTGCCGA CAACAGAGGC CTATCAGCCG GTACAGCGTT TCAGGCTGTT TTTTCTGGGG GGGATGATCC TGGTTATGCT GATGGCAGTC TGGGGGGTCC GGCTGCTTGT CGGGACGTTT ACTGCCGGAC TTGCCAGGCT TAGTGAACGC ATGGAACAGA TTGATCCGCA ACATCTGGCA GATGCATCAC CTATAAAGCT TTTGAGCGAC GATGAAGTGG GCCGATTGGC AGCAACGTTC AACAACCTGC TGACTGAGGT GGCGCAGACA GACAAGCGTC TACGGGAAAG CGAAACAAAC TTTCGAACTT TTTTTGATAC CATAGACCAT TTCTTGTTTG TGCTGGATCA TAACGGTCTG ATACTCAAGG TGAATCAAAC GGTTACTCAA CGTTTGGGCT ATGAAGAATC AGAACTGCTG GGGCAGCATG TGCTGGTTAT CCACCCGGCA GAGCGGCGTG ATGAAGCCGG CAGGATCATC ACAGAAATGC TGGCTGGTAC CGTCTCCTTC TGCCCGGTAC CGCTGGTTTG TAAGGATGGT CGCTTGATAG CGGTGGAAAC ACAGGTGGTG GCAGGGACCT GGAACGGCCG CCCGGCGCTG TTTGGCATTA CGAAGGATAT TTCCGTTCTG CAGGAGTCGG AAGAGAAGTT CTCTCGGGCT TTTAATGCCA GCCCGGCATT GATGGCCCTC AGCACACTTG AAGACGGGGT CTACCTTGAT GTGAACGAGG CTTTCTTGCA GCAGTCGGGC TTTGCTAGAG ATGAAGTAAT CGGAAAGAGT TCTCTGGAGC TTGGGCTGTT TACCGATTAC GAGCAGCGGC TTGAGATGAG GCGTCTGCTG AATGAGCAGC AGCGGGTCAG AAACAAAAAA ATTGTCATGC GATCAAAATC AGGCGGGTTG CTGTATGGTC TGTTTTCTGC TGAATTAATC CGGCTGCAGC AACGGGATCT GCTTCTGACG GTAATGGTTG ATATAACCGA TCGCGTCAAT GCGGAACATG CCCTGCTGGA GGCAAAGCAG GCAGCGGAAT CTGCCAGCCG GGCCAAGAGC GAGTTTCTGG CTAACATGAG TCATGAGATC CGTACGCCAA TGAACGGTGT GCTGGGCATG GCCGAACTGC TTGCCTTCAC CGACCTGACA GCTGAACAGG AACAGTACCT GGCCTGTATC AAAAGCTCTG GTGATAACCT GTTGGCATTG ATCAATGATA TCCTTGACCT TTCCAAGATT GAGGCTGGCA AGATTGAGCT TGAATATGCT GATTTTTCGC TCAGAAAGGC AATTAATGAC GTTGTTACTA CCCAGATATC CGCTATTCAT ACCAAACGTC TGCAGTTCTC ATGCGATCTT GCCGAGGATC TGCCTGAGAT CGTGCTGGGT GACCAATTGC GCTTTAAACA GATCCTCTTG AATCTGCTTT CCAATGCCAT CAAATTTACT GATCATGGTA GTGTCAGTAT TAGTGCTGAA TTGATAGAAT GTCATTCATT TCAGTCGTTT GTGCGTGTAA CTGTAGCTGA CACCGGCATC GGCATCCAGG CCGAAGCACG GCAGACGATC TTTGCACCCT TTACCCAGGC CGATAGTTCT ACTACCCGTC GCTTTGGCGG TACCGGGCTG GGGCTTGCCA TCAGTCGGCA GCTGGCAGAG TTGATGGGTG GGGATATCGG GCTGGAAAGC GAACCGGGCA GCGGCAGTCG TTTCTATCTT GATCTCCCGT TTGGTACCAG CAAAGGTAAA CTGCAGGGGA GTGAAACCAT GCCGTCGGCC ATGTTTTGGG ATGGTCCTGC AGTTACGGTG CTGGTGGCTG AAGATAATGT CATGAACCAG CAGTTTATCA GCGGACTGCT GAAAAAATTG GGACTTGGCT GCCAGTTGAC CAGCAATGGT CAGGAAGCGT TGGAACGCTG GCAACAGGGC GATATTGACC TGATCTTGAT GGATATCCAG ATGCCGGTAA TGGGCGGGGA GGCGGCGTTG CATCAATTAC GGCAGATGGA ATCGGAGAGC GGCCGGCATG TTCCGGTGGT CGCCTTGACG GCCCACGCCT TACGGGGCGA TCAGGAGCGA CTGCTGGCTG CCGGGTTTGA CGGTTACCTG TCCAAACCGC TTAACTTGAA AGAGTTGATG GTTGAGTTGA AGCGGGCCAT TGATTCTCAA AACAGCGCAG CTGTGTAA
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Protein sequence | MRFSTIQSRL IVSISLFLLL VMSGAAIGIY LYFKQQTVSL VQAQQFAMVS TLASGLDDKL SSAQLALIRS AGSAPRDLFN NPEKAQAWLN SRTGTKSIFS GGLFLFTPEG MLLVENPRLP SRRGRDFSFR EYYLKTVASG KPVISNPYPS SIHGRPSIMM TVPLFHADGR LSGIMGGALD LLDKDSFLNV LTRTRVGKSG YFYLYAQDRT MIAHPDPSRI MQQDVLPGMN RLFDKALEGF EGSGETVNSK GVRALSSFKR LKSAGWILAA NLPTTEAYQP VQRFRLFFLG GMILVMLMAV WGVRLLVGTF TAGLARLSER MEQIDPQHLA DASPIKLLSD DEVGRLAATF NNLLTEVAQT DKRLRESETN FRTFFDTIDH FLFVLDHNGL ILKVNQTVTQ RLGYEESELL GQHVLVIHPA ERRDEAGRII TEMLAGTVSF CPVPLVCKDG RLIAVETQVV AGTWNGRPAL FGITKDISVL QESEEKFSRA FNASPALMAL STLEDGVYLD VNEAFLQQSG FARDEVIGKS SLELGLFTDY EQRLEMRRLL NEQQRVRNKK IVMRSKSGGL LYGLFSAELI RLQQRDLLLT VMVDITDRVN AEHALLEAKQ AAESASRAKS EFLANMSHEI RTPMNGVLGM AELLAFTDLT AEQEQYLACI KSSGDNLLAL INDILDLSKI EAGKIELEYA DFSLRKAIND VVTTQISAIH TKRLQFSCDL AEDLPEIVLG DQLRFKQILL NLLSNAIKFT DHGSVSISAE LIECHSFQSF VRVTVADTGI GIQAEARQTI FAPFTQADSS TTRRFGGTGL GLAISRQLAE LMGGDIGLES EPGSGSRFYL DLPFGTSKGK LQGSETMPSA MFWDGPAVTV LVAEDNVMNQ QFISGLLKKL GLGCQLTSNG QEALERWQQG DIDLILMDIQ MPVMGGEAAL HQLRQMESES GRHVPVVALT AHALRGDQER LLAAGFDGYL SKPLNLKELM VELKRAIDSQ NSAAV
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