| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1458 |
|---|
| Symbol | |
|---|
| ID | 6366328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1518960 |
|---|
| End bp | 1521974 |
|---|
| Gene Length | 3015 bp |
|---|
| Protein Length | 1004 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642676859 |
|---|
| Product | M6 family metalloprotease domain protein |
|---|
| Protein accession | YP_001951697 |
|---|
| Protein GI | 189424520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03296] M6 family metalloprotease domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000451067 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC CTTCTTACAA ACGCCTTTCT GTCGGCATCC TGTTCGCACT ACTGTGTGTG
CTTGCCTCAT CCGCACTTGT GTGGGCAGCC CCGTTTGCAA AGGATTTTCA GTTTACCCAA
CCGGACAACT CGAGGATCAC ACTACAGGGG CAAGGTGATG AATTCCATGC CGTCTTTGAA
ACAAAAACCG GCTACACGGT GCTCTTTGAC CCCAAAACAA AGGCCTACTA TTACGCCACA
CGTGCGGCTG ACGGAAAGAG TCTCGTCTCT ACCGGCGTAC TTGCTCACGA CAAGCCCCCC
CGGGGTCTGA ATCAGCATAT CCGTATTGAC GCAGCAGCAG CTGCTGCTGC TGCCCGTGCC
AAAAGAGCGA AGTGGGATCA GGAGATCGGG CTGTCGGAAC GCTGGAAACA GTTGAAGGCA
AAAAAACTGG GGGAGCTCAA GAAATCAGAC AGCCCCACGC TTGAATCTGC TCCGGAAGCA
TCCGCAACCG GCAATGGAAG TTCCAGTGTA CTTGCCCCAC CCTCTTCAAC AACACTTGGC
GTGAAGCAGG GCCTGACGCT GCTGATCGAC TTTTCCGACG ATCCGGCCAC CATTGCCGAC
AGTGAGATAG ACTCATTTCT TAATAGCGAC TCCTATTCCG GTTACGGCAA CAACGGTTCG
GTCAAAAAGT ATTTCAGCGA TGTATCCAAT GGCCAGCTGA CCTACACCAA CGTGGTGATT
GCCTATGTAC GGATGGCGCA GCCCAAAAGT TACTATAATG ACATATCAGT TGACGACAAC
TGCGGGGACC AGGGGCGCCT GCTGATCAAT GATGCCCTGG CAATCCTGAA GGCCAGACCT
GATTACACCA GCACCATCCT GCCAACCTTA AATGCGCTTA CGGCAGATGC CTACGGTAAT
GTTGCCGCTT TTAACGTGTA CTTTGCCGGT GCGACCAGCG GAGTCTGGTC AAACGGCCTC
TGGCCCCACT CATGGGTGCT GGCAAGCCCG GTGGCATTGG GCAACGGGAA AAACCTGTAC
TATTATCAAA TCACCAATGT CGGATCGTCA CTGGAACTGG GTACCTTCTG CCATGAAAAC
GGTCATATGC TCTGTGACTT CCCGGACCTG TACGATTATG ATTACGACTC AATAGGCGGT
GCCGGCAAGT TCAGCCTGAT GGGCTATGGC GGCGGCGGCA CAAACCCGAG TCAGGTTGAT
GCCTACCTCA AGCGGGCTGC AGGCTGGGCC ACCACCATCG ATCTGACCAG CGTATCAAAC
AGCACCGCCT CCCTGACCGC AGCGCCAACC AGCGGCTACA ACACCTTCTA CCGCTACCAG
AAACCCGGCG TCTCCACAGA ATATTATCTC TTTGAAAACC GGCAAAAAAC CGGCAGAGAC
AGCGGCCTGC CCGCTGCAGG CATCGCCATC TGGCATGTTG ATGAACTGGG TGACCGGGAC
AACCAGAGCC TGACCCCCAA TACAAGCCAC GCCAATTATG AGCTGACCCT GGTCCAGGCC
GACAACCTCT GGCATTTTGA AAACAACCAG AACAGCGGCG ATGCCAATGA CCTCTACTAT
CCGGCTAACA CGGCAACGGC CTACTCCAAC GCCTTCCATG CCTCAAGCCT CCCCAGTGCC
GTCTGGTGGG ATGGGACCGG ATCAGCACTG ACATTCAACA GCTTCAGCAC ATCGGCAGCG
ACCATGACAT TCAGCGTTGC ACCGGCCGTT ACCAGAACCC TGACCGTTTC CAAAACCGGC
AGCGGCACCA TCAGTTCATC TCCGGCCGGT ATTTCATGCG GCAGCAGCTG CAGCAACAGC
TTTGTCCAGA ACTCTTCGGT AATCCTGACG GCAACCGCTG ACAGCAATGC CATGTTCAGC
GGCTGGTCCG GCGGCGGCTG TTCCGGTACC GGCACCTGCA CTGTCAGCCT CACCACAGAC
ACCACGGTAA GCGCATCCTT TGTTCCGGCC ACCACAACCA CCGTACTGTC AGAGAGCTTT
GATGCCGGCA CCACGCCAAC AGGCTGGAGC ATTACAGACA ATGCCGGCAC CGGAGCGGTC
TGGCGTTTCG ACAACCCGCA GGGCTATCCC AACGACACCG GCGGCACCGG CAATTTCGCC
ATTGCTGACA GTGACTATGC CGGTACCGTC AACATGGATA CAGAGCTACG CACACCGGTC
TTGAACCTGG CCGCGTACAG CGTCGTCTTG TTGAAGTTCA AGACGTTTTT CGATCATTAT
TCATCAGAAA TTGCGAATGT CGATATCAGC AGCAATGGAG CCGCAGGCCC CTGGACCACT
GTCTGGAGCA AGAGCCTTGT TGACTATATC GGATCAGAGC AGATTGATAT TTCATCGCTT
GCAGCAGGCA GATCGAATGT CATGGTGCGT TTCAGATACT ATAATGCCAA TTACGATAAT
GATTGGGATA TTGATGATGT GGTGGTGACA GGGATTATTC CTGTTTCCCA GCCCACCCTC
ACCGTCAACC ACGCCTACAC CGCTGCCGGG GTTGTCAAAG GCGGCGGCAG CATCAGTGGT
TCAGGTATCT CCTGCAGCTC CGTCAATGGC GGCACTAAGA CCGGCACCTG TTCGGCATCA
TTTAACAGCG GCAGCACCGT TACCCTGGCT GCGGCGGCTG ATGCAAACTC AACCTTCAGC
GGTTGGAGCG GAGGTGGTTG CTCCGGCATA GGCGGTTGCA GTTTCAGCAT CACCGCCGAC
ACCACGGTAA CCGGCAGCTT TGCCGGTGCT TACAAGGTCA GGATCAGCGG AGGCAACGGT
TATGACACCT TAACCCTTGC TCACACCAAT GCTGCTTCCG GCGCGACCAT ACTGGCACGT
CAACTTCACA ATGCAACGAC CCTGGCAGAG GAACCATTTA CAGAAAACCT GACCGTAACC
AAAGCCGTTA CCCTTAAAGG CGGCTACAAC GCCGGGTTCA GCAGTAATGC CGGTCTCTAC
AGTACTCTCA GCGGTATCCT CACCATTGGG GACGCTGGCG GCAGTCTGAC GGTGGAGAAT
CTGATCATAC GGTAA
|
|---|
| Protein sequence | MRHPSYKRLS VGILFALLCV LASSALVWAA PFAKDFQFTQ PDNSRITLQG QGDEFHAVFE
TKTGYTVLFD PKTKAYYYAT RAADGKSLVS TGVLAHDKPP RGLNQHIRID AAAAAAAARA
KRAKWDQEIG LSERWKQLKA KKLGELKKSD SPTLESAPEA SATGNGSSSV LAPPSSTTLG
VKQGLTLLID FSDDPATIAD SEIDSFLNSD SYSGYGNNGS VKKYFSDVSN GQLTYTNVVI
AYVRMAQPKS YYNDISVDDN CGDQGRLLIN DALAILKARP DYTSTILPTL NALTADAYGN
VAAFNVYFAG ATSGVWSNGL WPHSWVLASP VALGNGKNLY YYQITNVGSS LELGTFCHEN
GHMLCDFPDL YDYDYDSIGG AGKFSLMGYG GGGTNPSQVD AYLKRAAGWA TTIDLTSVSN
STASLTAAPT SGYNTFYRYQ KPGVSTEYYL FENRQKTGRD SGLPAAGIAI WHVDELGDRD
NQSLTPNTSH ANYELTLVQA DNLWHFENNQ NSGDANDLYY PANTATAYSN AFHASSLPSA
VWWDGTGSAL TFNSFSTSAA TMTFSVAPAV TRTLTVSKTG SGTISSSPAG ISCGSSCSNS
FVQNSSVILT ATADSNAMFS GWSGGGCSGT GTCTVSLTTD TTVSASFVPA TTTTVLSESF
DAGTTPTGWS ITDNAGTGAV WRFDNPQGYP NDTGGTGNFA IADSDYAGTV NMDTELRTPV
LNLAAYSVVL LKFKTFFDHY SSEIANVDIS SNGAAGPWTT VWSKSLVDYI GSEQIDISSL
AAGRSNVMVR FRYYNANYDN DWDIDDVVVT GIIPVSQPTL TVNHAYTAAG VVKGGGSISG
SGISCSSVNG GTKTGTCSAS FNSGSTVTLA AAADANSTFS GWSGGGCSGI GGCSFSITAD
TTVTGSFAGA YKVRISGGNG YDTLTLAHTN AASGATILAR QLHNATTLAE EPFTENLTVT
KAVTLKGGYN AGFSSNAGLY STLSGILTIG DAGGSLTVEN LIIR
|
|---|
| |