| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1455 |
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| Symbol | |
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| ID | 6366316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1510424 |
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| End bp | 1513420 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642676856 |
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| Product | M6 family metalloprotease domain protein |
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| Protein accession | YP_001951694 |
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| Protein GI | 189424517 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00413675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAATA AAATTATCAT TTTTGTCATC GGCATCAGTC TTTGTGCCAC GCAACTGCAT
GCCGGTCCGG CATCGCCGGA CCTAATTGAG GTGACGCAGC CAGATGGTAG TAGTTTCAAA
ATCCGTAAAC AGGGGGATGA ATTTCAGAAC TGGAGTGAAA CCGAAGCAGG GCATACTGTT
CTGAAAAACA AAAAAACAAA AGAATGGGAA TATGCTACTA AAAATGCTGA CGGCTCACTT
GGTTTGTCAG GCCAGAAGGT TATGCCTCAG CAAAAAGCTC CTGCTGATCT ACCAAAGCGT
CTGAAGCCGC AAAGAAACAC TGAGGCAGAA AAGCTGCTCT CAGAGCACAT TAGAAACACC
TACCAACAAC GTCTGAATCA AGCATCTGCA ACACCCAGTT CGGGGATCTC AGCTGGAACA
GGTAATTGGG TCCCATTCCC GGTTTCAGGA AATCGAAACC TCCTGATTGT TTTGGTTAAT
TTTGCAGATC GCACTATGAC AACAACAACT CCTGCAAGTT GGAGCGCAAA AATATTTGAT
ACAACTGCCG GTGCTAAATC AGTAGCAAAA TATTTCAAAG ACAACTCATT CAGTACGCTT
AACGTTCTAC CGGCAACTCA TACCCAATCC GCAACGCCTG GTGTTGTCAG TGTTACCGTT
GCAGACAATC ATCCTAATTC TGGCAATAGT TACGATTATA CTTCCGAGAC AACCATTCTC
AATCATGCCC TGGCACAAGC TGCCTCATAT GTAAATTTTG CTTCGTTTGA CACCAACAAT
AATGGCACTC TTGAACAATC AGAGCTTTCC ATTTATTTCA TCTACGCTGG CTACGAAGAT
TCAGGCAGTG ACAAGACACC AAAGATATGG GCACATGCTT GGGGGGGGTA CGACGTACTT
GCAAGCGGTA AATACGTCAC CCGCTGGGCT ATTAACGGTG AACTTAACAA CTCAGATGTT
CAGCATCCGA TGGGAGTTAT AGCACATGAG CTTGGCCATG CCTTGTGTGG ACTGCCAGAC
CTGTACGACA CTTCATATAG CAACGGAGGC ATGGGTCATT TTTCTCTCAT GGCAGGCGGC
AGTTGGGGAG CAGATATCGG AGAGTATAGT GGTGTAACAC CGACAGCTTT AGATGCCTGG
ACACGGGAAT ACCTTGGCTG GGCAACACCG GTCACTCCAA CCTCATCTGG CAACTTGTCA
CTAGCCCACC CGCTTTCCTC TCAGAATGCA GTCTATAAAT TCGTGTCGCC ACTTATCAGC
AGTACTGAAT ATTTTCTGGT TGAAAACCGC CAGCCTACTG GATGGGATCT TGGGCTTCGT
AGTTATCTAG GTTCAGGGTG GCTGGGTGGC TTGCTGATTA CCCATATTGA CATTACATCC
GGCTCTGTTG GAGGTAATGA TATTAACGAT TACGAGACAA ATAATGTTGC CGGTGGGGGG
CACCAGGGGG TCGTACCGGT CCAGGCTAGC ACCGCAAACT GCAACATGCT GACCACAACA
AGCCGAGGCT GCAGCACCAC CCTCTACTAT TCCAGCAACA ATGCCAGCTG GGGACCGGTC
ACCACCCCCA ACTCAAACTA CTACAGCGGC ACTGCCACCA ACTTTAGTCT AACCGGCATC
TCAGCACAGG CCGCCACCAT GACCGGCAGC ATTTCTTTTA TCCCTCCACT GACCAAGACC
CTGACAGTTT CTAAAGGCAG TACCGGCAGC GGGACGGTCA GTTCCTCGCC GGCCGGGATC
TCATGCGGCA GCACCTGCTC GGCAAGCTTC CTGCAAAATG AGACCGTGAC CTTAACTGCA
GCTGCCGACG CAGGTTCAAT CTTCACCGGC TGGTCCGGCG GCGGTTGCTC CGGCACTGGA
ACCTGCGTGG TCAGCCTGGC CAATGACACG ACTGTGACGG CAAGCTTCGC CACGGCAACC
ACCCTCATCA GCGAAAACTT TGACAGTGTG ACGGCACCAA GCATTCCTTC ATTTTGGTCA
ACAAATATTG TTACAGGCAG TTACAACTGG GCTACAAGCA CCGACGCCGT TACTCCTCAC
AGTGGCGCGA ATGCACTTTA TTATAATTCC TATTGGGCTC CATCTGGCTC TGCAGCAGCG
CTGATATCTC CGTCGTTTTC ATTGGCAACG ACAACCAACA ATACCATTTC ATTCTGGATG
TACAGGGACA CCAACGGTTC TTCTTATGCC GACAGAGTTG AGATCTACGT CAATAATAGT
AACAGTTTGA CCAATGCAAC CCTACTGGGA ACCGTTAATC GCGCAACAGC TCTTGCACCT
GCCGTCAATT CATACGGGTG GTACAACTAT TCATTCACCA TTCCAGAATC ATTTAATTCT
GCAACCAATT TCCTGATCAT AAAAAGCATC AGTGCCTACG GTTACAATAT CTACATTGAC
GATATCAGCG TTACAGGTAT TCCTCTTTTA CAGTACACTC TGACCGTTAA CCACGCCTAC
ACCGCTGCCG GAGCTATCAA GGGCGGAGGC AGCATCAACG GCTCCGGCAT CTCCTGTAGC
GCCGTCAATG GCGGTAGCAA GACCGGAACC TGCTCAGTCT CCCTTGACGA TGGCAGCACT
GTGACCCTTG CTGCAGCGGC TGATGCAAAC TCAACCTTCA ACGGCTGGAC CGGAGGAGGT
TGCTCCGGCA CCGACGGCTG CAGCTTCACC ATCGCTTCCG ATACCACCGT AACCGGCACC
TTTGCCGGTG CCTATAAGAC CAAAATCAGC GGTGGCAACG GATATGACAC CTTAACCCTT
GCCCATGGCA ATGCCGCTGA CAACGCCACT ATCCTGGCCC GCGAACTCCA TAATGCCACC
TCCCTGGCTG CAGAACCGTT TACAGAAAAC CTGACCGTAA CCAAGCCGAT AACCCTCAAG
GGTGGCTATA ATGCCGCATT CAGCAGCAAT GCCGGTCTTT ACAGCACACT CGCAGGCATC
CTCACCATTG GCGGCACAAG CGGTAGCCTG ACAGTGGAAA ACCTGATCAT AAAATAG
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| Protein sequence | MLNKIIIFVI GISLCATQLH AGPASPDLIE VTQPDGSSFK IRKQGDEFQN WSETEAGHTV
LKNKKTKEWE YATKNADGSL GLSGQKVMPQ QKAPADLPKR LKPQRNTEAE KLLSEHIRNT
YQQRLNQASA TPSSGISAGT GNWVPFPVSG NRNLLIVLVN FADRTMTTTT PASWSAKIFD
TTAGAKSVAK YFKDNSFSTL NVLPATHTQS ATPGVVSVTV ADNHPNSGNS YDYTSETTIL
NHALAQAASY VNFASFDTNN NGTLEQSELS IYFIYAGYED SGSDKTPKIW AHAWGGYDVL
ASGKYVTRWA INGELNNSDV QHPMGVIAHE LGHALCGLPD LYDTSYSNGG MGHFSLMAGG
SWGADIGEYS GVTPTALDAW TREYLGWATP VTPTSSGNLS LAHPLSSQNA VYKFVSPLIS
STEYFLVENR QPTGWDLGLR SYLGSGWLGG LLITHIDITS GSVGGNDIND YETNNVAGGG
HQGVVPVQAS TANCNMLTTT SRGCSTTLYY SSNNASWGPV TTPNSNYYSG TATNFSLTGI
SAQAATMTGS ISFIPPLTKT LTVSKGSTGS GTVSSSPAGI SCGSTCSASF LQNETVTLTA
AADAGSIFTG WSGGGCSGTG TCVVSLANDT TVTASFATAT TLISENFDSV TAPSIPSFWS
TNIVTGSYNW ATSTDAVTPH SGANALYYNS YWAPSGSAAA LISPSFSLAT TTNNTISFWM
YRDTNGSSYA DRVEIYVNNS NSLTNATLLG TVNRATALAP AVNSYGWYNY SFTIPESFNS
ATNFLIIKSI SAYGYNIYID DISVTGIPLL QYTLTVNHAY TAAGAIKGGG SINGSGISCS
AVNGGSKTGT CSVSLDDGST VTLAAAADAN STFNGWTGGG CSGTDGCSFT IASDTTVTGT
FAGAYKTKIS GGNGYDTLTL AHGNAADNAT ILARELHNAT SLAAEPFTEN LTVTKPITLK
GGYNAAFSSN AGLYSTLAGI LTIGGTSGSL TVENLIIK
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