| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1452 |
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| Symbol | |
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| ID | 6366297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1501212 |
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| End bp | 1505606 |
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| Gene Length | 4395 bp |
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| Protein Length | 1464 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642676853 |
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| Product | YD repeat protein |
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| Protein accession | YP_001951691 |
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| Protein GI | 189424514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTTC AGTCCGGCCC GATAACGTTT ACTTTTATAG TAGGAACCCT CCTCTTAAAC
CTCCGCTTCT TGTCCCTGCC TCGGATTCTT GTCCTTAGCC TGCTACTCAC TGCGGTTTCG
CCGGCATTCG TGCTTGCTGA CGATATCTGC GGCTGGGGTA CGTCCACCAA GTGGAAGGTT
AAGATGCATC TGACCCAGGT GCTGAGCAAG TCGGGAATTC TGCAATCAGG GCCTGACTGT
ACTGCCAACT ATGTGCTGGC GCTGGACCAT GTCTCGGATG TAAGAGGCGA GTTCATCAGC
AGCGGAACGC CTGGCCAGTA TCAGGGAGAC CTGACGAGCA CTGAGGTCGT GAACAACATG
ATGGACATTC CGTTCACCGG CAGGCCTGAG TGCAGCTATG GGAATGTCTA CTTTACCGAA
ATAGGTACTG GAGAAGGAGC TGAAAGTGCT GTTCCGTTTA CCATCGATAC TGCGATGGGG
AAGTACACCA TCAGATTTCC ACATACCGGG GTTGATATTC CATTCAATTA TATCACCATG
TATGGAGGGT ATTCGGGAAC ACTTAATAAA GAGATCAACG GCGGGTTCAT TATAGACTAT
CCAGGCATGG TACTTGCCGA AAGCCCATCC GATCCGGTCA CTACCCTTGA ATTTCCGCTG
CCAGGCGCCT CCCCCCAAAT CATCACCGGC GAAACCACCT TTCCTCACCA GCAGTACCCT
GAAATTCCGG TCACCTGGTC ATGGGAGTTG ACACCTGATG CCGGCGGGGC TGAAAAGGAG
CTGGGCGCAC CCGGCGGCAT GGGCAAGGGG AACGGTGGAG ACATGGCCCC TGGCGCGGGA
TACGGTGCGC CGAGCTGGAC CGTCAATATG GCGAACCTCA ACATCTTCAT CACCGATACC
CCGCTTTGGT ACAAAAGCCC GATCGGCCCT GCGGTGGAAG TCTCCTTCAG CTACAATTCC
AAGGCGGTGT CCAACCGCTT TGAACCGGCC GGCCGCAACT GGCAGCTGAA CTACGAGAGC
TACCTTGCTC CTGATCCGGT CAGCGGCGAT GTGACCATCT ACATGCCGGA CGGGCGCCGC
GATGTCTATA CCTATGATGC AAACACCGCG AAGTTCACCC CGCCCTACCG GGTCTTCAAC
GAGCTGACGG TGGTGGCTGG GGATTACCGG CTGGCCTTTC CCGACGGCAC AGTCTATATC
TACAAAGTCC CCTCCGGCCA ATTTATCTGG GCCTTTCTGA CCGAGATCCG CGATCCCCAC
TATCCCACCG ACCCCAGTAA CAAGCTGACG CTCTATTGGG ATCCGCTTCC CAACTCGCCG
TGGGGGGGAA AGCTCAACCG GATCACCGAT GCCCTGGGGC GCTCGACCAC CTTCTTCCAT
AATGCCGACA ACCGGATCTA CTCGATCCTT GACCCGTTCG GCCGCACCGT TTCCCTCACC
TACGACAGCT TCGGCAACCT GACCCGCATA ACTGACATGG GAGGCTTTTC AAGCTCCTTC
AGCTATGACG GGTGCGGCAC CATCCAGACC ATAACCACCG GAAATAACAA GGTGACATTT
ACCTCCGGAT TCAACAGCCT GACTGTCAGT GATTACATGG GGAGCGAGAC CTTCACACTC
AATCCGCTGA CCGGAGAAGC AAGCTATCAG GGGGCCAATG CAGCAGCCGG TTCCACCTAC
GGCTATACCA AGACCGCCAC ACCGGACGGT AACAGTGATA TCACCGGCTT CCAGACACCT
GAAGGGGTCG GTTTCAATTA CAGCTATGAC AGCAAGGGAA ATCTGCTCAC CCAAACCCTG
CAGGGGGCAG CTGGCAACGA GACCTCCACC TTTACCTACA ACTCAAAGGG GAAGGTTACC
TCGGTTGTGC CACCCGTCGG TGCCCGCACT GATATCACCT ATGCCGCTAA TGCTGTTGAT
CCGCTGACCG TGACCCAGGC CGGGCTTGGC ACCATTACCG CCACCTACAA TACGACCCAT
GACATCCTGT CGCTTACAGA TCGGATGGGA CTTGCCAAAA CTTTTACCTT CAACCTCTCC
GGTCAGCCAA CCAGCTCACT GGGCGCCGGA ATTCTGACCA GTTTCAGCTA TGACAGCAAC
AAACAGCTTA CCGGCATCAC CCGGGCCGGG ACGGCAGTTG GCAGCTACAG TTACGACACC
ATCGGCCGGC TTGCCTCATA TACCGACCAG AACGGCTTCA CCCTGCAGCG GAGCTACAAC
AACCTCGACG ACCTGGTCAG CATCAGCTAT CCTGACAGCT CGTCAGCGGC CTTCATCCGT
TCGACAACGG TACCGCACCT GCTCGACAGC ATGACCGATC AGGCCGGGCG CACCACCTCC
TATTTCTACA ACCCCCACAG TCAGCTGCGG GAAATACTCG ATCCGATTGG AGGACGCACT
CGTTTCACCT ACGATGCGGC CGGCCATGCC AGCCAGCTGA CCGACCCCAA CGACAACGTT
ACCTACTTCA GCTACAACAA GGACAACCGG CTGACCCGCA AGCAGTACGC GGACGGCAGC
AGCATACAGT TCGCCTATCC CCATGGCCGG ATGACCTGGG CCAGCAATGC CCGGGGGACC
ACCTCAACCT ATTCGTATGA CCGTAACGGC AACCTGCTGA CAGTGTCCTA CTCAGACGGC
ACGCCGGGGG TCACCACTAC CTACGATGCC TATAACCGTC CTGTCACCGT CGCCGATGCC
CTGGGCAGCC GCACCATCAG CTACGACGCA TCCTCCAGGG TGACCTCCAT CGACGGCCCC
TGGGCAAGCG ATACGATTAC TTTCAGTTAT GACACTTTGG GGAGGAAGAC CTCAGTAGCG
CTCCAGCTGG GTCTGACCGC AAACTACAGC TATGACTCAC TTGACCGGTT GACAACGGTA
ACCGGTAACG GCACGACCTA CACTTACAGC TATCAGGGGG GAGGGACGCT CCTGCAGCGG
CTGGCCCGTT CCGATAGCAG CAAGACCGAC TACAGCTATG ATCCGGTTAT GAAACGTCTG
CAGCAGCAGA TTAACTATCT TTCGACCGGC ACGGTCCTGA ACGGCTACAG CTACAGCTTC
GATTCCCTTG GCCAGCCAAC GGGCGAGACC GTTACCAACG GCCCGGCCCT GCAGTTTGTG
GCCGCCGGAA CCGTTGATGC TACCTACAAC AATCTGAATC AGGTTGCGAC CTGGGGCGGA
TCCGCAACGG CAATCAGCTA CGATGCCGAC GGAAACATGA CCAAAGGACT CACTCCTGAT
GGCCGGGCGT TTACCGCGAC CTACGATGCT GAAAACAGGA TGACCTCGAT CCAGTACACC
GACGCCGGTG GTGTGATCAG GAGGCAGGAG TTCACCTACG GCTCCGACGG CTATCTTGGG
ATTCAGAGAA GTTTCGCCAA CAGCGTGCTG ACCGGTGAAC GGCGTTTTAT CTGGGATGCC
GGAAAGCTGC TGCAGGAACG TGACGGCAGC AACGCCGTGG TGCGTGACTA TCTCTGGGGG
ATCAATCAGC CGGGCGGCGT GGGGGCACTG CTCTCGCTCA AACAGGGCGG GGCGGCGTAC
CAGGTGTTTT CCAACCCCCG GGGGGATGTC ACCGCTGTAC TGAACAGCTC CGGTTCGGTT
GTCGCCTCAT ATGCCTACGA CCCGTTTGGT GGAACCCTTG CAGCCAGCGG CACCCTCAGC
CAGCCGATCC GCTATTCAAC CAAGCTGTAT GATGAAGGGA CCGGGCTCTA CTACTTTGGC
CACCGCTTCT ACTCGCCGCA GATGGGGCGC TGGCTCTCCC GCGATCCGCT GTCTGAGATG
GCCTCCATCA ACCTGTATCG CTTTGCAGCC AACAACCCGC TCACTCACTT TGATCCGTTC
GGTGCTGCCG ACAACGGCGG GTTCTGGGAT CGGCCGGAGG TTCAGGCCCA GCTCCAGGCG
CAACGGGAGG CATTGCAGGC AAAACGTGCC TCGGAAGTCA CTACCTTTGA GAAGGTAAAA
AACAGCATTG GATCAGCATT CAAGTGGATC GGCGACAAGT TCAAGGAACA GCCGGAAATG
GCCAGGTCGA TCGAGGAAAA AGTGGCTAAT ACCGCACTTG AAGCCAATAA GTACACCAAG
GCAGGCAAGG AGTGGAACGA ACGGATCAAC ACCGGGATTC AGATGGCTGA GGATTATGGC
ACCGTAAAGG CCGCCCTCAA GGATGATGAT CCTGCCTCTG GTCTGACCCT GATCAAGGTA
GGAGCAAAAT ACACTGTCGG TCGTATACCG GGCGTCGGTG AGGCATATTC AGAAGTCATC
GTTAAAGCGG TCGAGACCGT TGAGAACGCT CCTGGCGGTG TTGAGGCGGC ACGCAGGATG
CGGGCGACCG GCGGCACCAA CAACAGCAAC GAAGCAGTCC AGTTGGGGCA GGTGGACAAC
GGAGGCGGGC AATGA
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| Protein sequence | MNLQSGPITF TFIVGTLLLN LRFLSLPRIL VLSLLLTAVS PAFVLADDIC GWGTSTKWKV
KMHLTQVLSK SGILQSGPDC TANYVLALDH VSDVRGEFIS SGTPGQYQGD LTSTEVVNNM
MDIPFTGRPE CSYGNVYFTE IGTGEGAESA VPFTIDTAMG KYTIRFPHTG VDIPFNYITM
YGGYSGTLNK EINGGFIIDY PGMVLAESPS DPVTTLEFPL PGASPQIITG ETTFPHQQYP
EIPVTWSWEL TPDAGGAEKE LGAPGGMGKG NGGDMAPGAG YGAPSWTVNM ANLNIFITDT
PLWYKSPIGP AVEVSFSYNS KAVSNRFEPA GRNWQLNYES YLAPDPVSGD VTIYMPDGRR
DVYTYDANTA KFTPPYRVFN ELTVVAGDYR LAFPDGTVYI YKVPSGQFIW AFLTEIRDPH
YPTDPSNKLT LYWDPLPNSP WGGKLNRITD ALGRSTTFFH NADNRIYSIL DPFGRTVSLT
YDSFGNLTRI TDMGGFSSSF SYDGCGTIQT ITTGNNKVTF TSGFNSLTVS DYMGSETFTL
NPLTGEASYQ GANAAAGSTY GYTKTATPDG NSDITGFQTP EGVGFNYSYD SKGNLLTQTL
QGAAGNETST FTYNSKGKVT SVVPPVGART DITYAANAVD PLTVTQAGLG TITATYNTTH
DILSLTDRMG LAKTFTFNLS GQPTSSLGAG ILTSFSYDSN KQLTGITRAG TAVGSYSYDT
IGRLASYTDQ NGFTLQRSYN NLDDLVSISY PDSSSAAFIR STTVPHLLDS MTDQAGRTTS
YFYNPHSQLR EILDPIGGRT RFTYDAAGHA SQLTDPNDNV TYFSYNKDNR LTRKQYADGS
SIQFAYPHGR MTWASNARGT TSTYSYDRNG NLLTVSYSDG TPGVTTTYDA YNRPVTVADA
LGSRTISYDA SSRVTSIDGP WASDTITFSY DTLGRKTSVA LQLGLTANYS YDSLDRLTTV
TGNGTTYTYS YQGGGTLLQR LARSDSSKTD YSYDPVMKRL QQQINYLSTG TVLNGYSYSF
DSLGQPTGET VTNGPALQFV AAGTVDATYN NLNQVATWGG SATAISYDAD GNMTKGLTPD
GRAFTATYDA ENRMTSIQYT DAGGVIRRQE FTYGSDGYLG IQRSFANSVL TGERRFIWDA
GKLLQERDGS NAVVRDYLWG INQPGGVGAL LSLKQGGAAY QVFSNPRGDV TAVLNSSGSV
VASYAYDPFG GTLAASGTLS QPIRYSTKLY DEGTGLYYFG HRFYSPQMGR WLSRDPLSEM
ASINLYRFAA NNPLTHFDPF GAADNGGFWD RPEVQAQLQA QREALQAKRA SEVTTFEKVK
NSIGSAFKWI GDKFKEQPEM ARSIEEKVAN TALEANKYTK AGKEWNERIN TGIQMAEDYG
TVKAALKDDD PASGLTLIKV GAKYTVGRIP GVGEAYSEVI VKAVETVENA PGGVEAARRM
RATGGTNNSN EAVQLGQVDN GGGQ
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