| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1391 |
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| Symbol | |
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| ID | 6367371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1427734 |
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| End bp | 1428939 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642676793 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001951632 |
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| Protein GI | 189424455 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.217202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGT CCCGCCTGAT CCGCTTCAAC CACCTGAATC ATCTGCGTTT GTTTCTCTCT
GCTGCCACGA TTGCCAGCCT GTTTCTTCCG GTAGCAGGCT GCAGTAAAAA AGAACCGTCC
ACAGGCCAGG TGCCGGTGAC CGAGGTGGTT GCCGTGACGG TTCAGCCCCA AACCGTACCG
GCTGTGTTTC CCTTTGTGGC CCAGATACAA AGCTCCCACC AGGTGGATGT GATGGCCAGG
GTAAACGGCT TTCTTGAGAA GATCAGTTAC CAGGAAGGGG AGCCGGTCAA GCAGGGACAG
GTGTTGTTTC TGCTTGATAA GAAGCCGTTT GTGGCAGCGG TAAATGCAGC CAGGGCCGCG
GTTGATATCA GGAAGTCCCA GCTGTTTACT GCCAAGGCCA GTCTTGACCG GATCAAGCCG
CTGGCTGATC AGAATGCTGC CAGCAAGAGC GATCTGGATA ATGCCATCGG CAACTTCAAG
ACCGCCGAGG CCGGTTTGCA ACAGGATCAG GCAAACCTGG ACAAGGCGTT GCTGGATTTA
AGTTATACTA CCATCACGTC ACCGGTCAGC GGTGTGGCCA GCCAGGCCCT GATTCGTGAA
GGGGGCTATA TCGCTGCCGG CAGCAGTTCC GCCAAGCTGA CCTATGTCGC CAAACTGGAC
CCGGCCTGGG TTGATTTCAG TGTGTCCCAG AACGAGCAGG CCAAGATGCG TCAGGCCGTG
GACAATGGAG AAATCGTCGG GCCAAAGGAG AACCGTTTTA CCGTTGAACT TGAACTGTCC
GATGGCAGGC GCTACCCCTT GGCGGGAGTG GTGAATTTTG CTGATCCTTC GTTTAATAAA
GATACCGGTA CCTATCTGGT GCGGGCTGAA ATTTCCAACC CGAAAGGGGT GCTGCGTCCC
GGCATGTTTG TCAAGGCCTA CCTGAAAGGG GCAACCCGTC CCAATGCACT GACGGTTCCC
CAACGGGCCG TGCAGCAGAC CAGCAACGGC CATGTGGTCT TTGTAGCCAA TGACAAGGGG
CTGGCAGAGG TCCGCCCGGT GGTGGTGGGG GAATGGGTTG AGCAGGACTG GATTATCAAC
AAGGGGCTCA AGGCCGGTGA CAGGGTGATT GTGGATGGCT TTATGAAGCT GGCCCCCGGT
GCCCCGGTCA AGCTGGTTAC ACCTGAAGAG TTGAAGAAGT CAGCTCAGTC GGCAGCAGTC
AAGTAA
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| Protein sequence | MELSRLIRFN HLNHLRLFLS AATIASLFLP VAGCSKKEPS TGQVPVTEVV AVTVQPQTVP
AVFPFVAQIQ SSHQVDVMAR VNGFLEKISY QEGEPVKQGQ VLFLLDKKPF VAAVNAARAA
VDIRKSQLFT AKASLDRIKP LADQNAASKS DLDNAIGNFK TAEAGLQQDQ ANLDKALLDL
SYTTITSPVS GVASQALIRE GGYIAAGSSS AKLTYVAKLD PAWVDFSVSQ NEQAKMRQAV
DNGEIVGPKE NRFTVELELS DGRRYPLAGV VNFADPSFNK DTGTYLVRAE ISNPKGVLRP
GMFVKAYLKG ATRPNALTVP QRAVQQTSNG HVVFVANDKG LAEVRPVVVG EWVEQDWIIN
KGLKAGDRVI VDGFMKLAPG APVKLVTPEE LKKSAQSAAV K
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