| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1372 |
|---|
| Symbol | rpsD |
|---|
| ID | 6366396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 1407767 |
|---|
| End bp | 1408393 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642676774 |
|---|
| Product | 30S ribosomal protein S4 |
|---|
| Protein accession | YP_001951613 |
|---|
| Protein GI | 189424436 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.179279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAGGT ATATTGGACC ATCCTGCCGT TTGTGCAGAA GAGAAAATAT GGAGCTGTTC
CTGAAAGGGG ACCGTTGCTA TACTGATAAA TGCGCCCTGA AGCGTCGTAA CTATCCTCCG
GGTCAGCATG GCCAGGGACG TTCTAAAACC TCTGATTACG GTGTTCAGTT GCGTGAAAAG
CAGAAAGTCA AGCGTTTGTA TGGTCTGCTT GAGAAACAGT TCCGTAGTTA TTTCGATCGT
GCAGACCGCA TGAAAGGCGT AACAGGTGAG AACTTGCTTT CACTGCTGGA GCGTCGCCTT
GATAATGTTG TGTACCGTCT TGGTTTTGCT TCGTCACGTT CTGAGGCACG TCAGTTGGTT
CGACATGGAC ATTTTGTGTT GAATGGACGT AAAGCGACGA TTCCCTCTAT TCAAGTGAAA
GCTGGCGATA CTATTGTGCT TCGTGAAAAA AGTCGCAATG TTGCAGCAAT CAGTGAAGCT
CTTGATGCAG TGGTCCGCCG TGGTATTCCT CAGTGGCTCG AACTTGATCG TGATGCCTTT
ACCGGATTAG CGAAAACAGT GCCGGTTCGT GAAGATATAT CGACTCCGAT TCAAGAGCAG
CTTATCGTTG AACTTTATTC TAAGTAA
|
|---|
| Protein sequence | MARYIGPSCR LCRRENMELF LKGDRCYTDK CALKRRNYPP GQHGQGRSKT SDYGVQLREK
QKVKRLYGLL EKQFRSYFDR ADRMKGVTGE NLLSLLERRL DNVVYRLGFA SSRSEARQLV
RHGHFVLNGR KATIPSIQVK AGDTIVLREK SRNVAAISEA LDAVVRRGIP QWLELDRDAF
TGLAKTVPVR EDISTPIQEQ LIVELYSK
|
|---|
| |