| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1281 |
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| Symbol | |
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| ID | 6367449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1329460 |
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| End bp | 1331406 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642676679 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_001951523 |
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| Protein GI | 189424346 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAT TGAAAGCGCT ACTGATTGCT CTGTTGCTTA TGACGCTCTG CAGCTCGCCG
CTCCATGCAG CGGCCCAGGG GGTGATCATG AACTTCACCG ATGTCGAGAT CGCCACCATG
GTGAAGTTTA TCAGCGAGTT GACCGGCAAA AACTTCGTCC TGGATGAACG GGTAAAGGGC
AAGGTCTCTG TCTTCTCCCC TTCAAAGTTG TCGCAGGACG AGGCCTTTGC CCTGTTCACC
TCCGTACTTG AATTAAAAGG ATTCACCTTG ATACAGGCTG GTAAGGTTTA CAAGGTGGTG
CCGACCGGCA GCGCCAAACA GGCCGGTATG AAGCTGGCGG ACAAGGAACG GATTCCCCTG
GGCGATGCCT TTCTGGCCCG GGTCTTCCCG CTTACCCAGA TCTCCTCCCA GGAGGCACTG
ACCTTCCTGC AGCCGATCAT TTCAAAGGAA GGGCATATCG GTTCCTTCGG CCCCGGCAAC
ATGCTGCTGG TGGTGGATGC TGCCTCAAAC CTGCAAAAGG TGGCCGACAT CCTCTCCCTG
ATCGATACAC CGCAGCGACG CGAAGGGGCA GAACTGGTCT ACCTCAAGCA CGGTTCTGCA
GAAGGGGTCA CCAAGGTTCT GCAGGAATGG CTGGCAGGAC GTGGAGCCCG CCAGGTTGCC
GTCGGAACTA CCCAGTCAGC AAACAGCGGA GCGGTACAGG TGCTTGCCGA CACCCGCCTG
AATGCCGTGC TGCTCTTTGG ACCGGAAAAA GACAAGAAAG ACATCCGTTC CCTGATCGCC
CAGCTGGATG TCACCCCGCC TGAGGCCAGC AGCAAGATCA ATGTCTGCTT CCTAGAAAAC
ACCGATGCCA CAGAAATGGC GAAAGTCCTA GATGGCGTGG TCAAGGGGAT CACCGCACAA
ACCACAACCT TGCAAGCCGG CACCGTCAGT GCGCAAAGCT CCCCCTTTGA CTCCGGCAAG
GTCACCATCA CGGCTGACAA GGCATCAAAC TCGCTGGTCG TCATGGCCTC ACCAACCGAT
TACAACAACC TGCTGCAGGT GATCAAAAAA CTGGACCGCC GCAGCAAGCA GGTCTTCGTG
CAGGTCCTGA TTGCCGAGAT ATCTCCGTCA AAATCCAGGG ACCTTGGTGT CCAAAGTGGC
GCCTTTGCTG TCGGGGCACT GGGCAAATAT CTGCAGGGAG GCGGTATTTA TGACCCCTTT
AACACCTTTG GGAGCCTCCT CGGTTCAGGT AGTAGCACGA GTCCTTTAAG CACCCTGATT
GCTGACAAAC TGAAAAACAC ATCAAAGCCG GTTACCGGAG CAGCTATTCT TCAGGCGCTT
GAGAGCGAAG GGATGCTTAA CATCCTCTCA ACCCCCAACA TCCTGACCAC CGACAACAAA
GAGGCAGAGA TCAATGTGGG GGAAAACGTG CCGTTCAAGT CCTCCAGCAC CCAGAGTACC
TTTGGCACAA CAGAATCAGT TGAACGCAAG GATATCGGCA TCAACCTCAA GATCAAGCCC
CAGGTCAGTG AAGGGGATTA TATCCGCATG GACCTCTATC AGGAAATTTC AGCAGTTAAG
AGTGACAAGG GTGACGCGGT GGACCTGGTC ACCACCAAGC GTTCTGCCAA AACCAGTGTG
GTGGTCAAGG ACAATGAAAC CATCGTGATT GGCGGCCTGA TCCAGGACAC TGAAGACAAC
ACTATCCAGA AAGTGCCGCT GTTGGGTGAC ATCCCCGGTC TGGGCTGGTT CTTCAAGACC
ACCACCAAGA CCCGCAAGAA GACCAACCTG CTGATCATGC TGACCCCGCA GGTGGTCAAA
GATGCCCGTG ACCTGGCAAG CATAACCGAG AGCCAAAAGG GTAAGTTCAC TGAAGCTGCC
AAAGAGTTCG GCCCGCTGAA TGTGCAGAAT GAGATCTCAG GCAAAGCGAC CAAGCCGGTA
AGCCAAGGGC AGGAGAGCCG GCCCTGA
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| Protein sequence | MKQLKALLIA LLLMTLCSSP LHAAAQGVIM NFTDVEIATM VKFISELTGK NFVLDERVKG
KVSVFSPSKL SQDEAFALFT SVLELKGFTL IQAGKVYKVV PTGSAKQAGM KLADKERIPL
GDAFLARVFP LTQISSQEAL TFLQPIISKE GHIGSFGPGN MLLVVDAASN LQKVADILSL
IDTPQRREGA ELVYLKHGSA EGVTKVLQEW LAGRGARQVA VGTTQSANSG AVQVLADTRL
NAVLLFGPEK DKKDIRSLIA QLDVTPPEAS SKINVCFLEN TDATEMAKVL DGVVKGITAQ
TTTLQAGTVS AQSSPFDSGK VTITADKASN SLVVMASPTD YNNLLQVIKK LDRRSKQVFV
QVLIAEISPS KSRDLGVQSG AFAVGALGKY LQGGGIYDPF NTFGSLLGSG SSTSPLSTLI
ADKLKNTSKP VTGAAILQAL ESEGMLNILS TPNILTTDNK EAEINVGENV PFKSSSTQST
FGTTESVERK DIGINLKIKP QVSEGDYIRM DLYQEISAVK SDKGDAVDLV TTKRSAKTSV
VVKDNETIVI GGLIQDTEDN TIQKVPLLGD IPGLGWFFKT TTKTRKKTNL LIMLTPQVVK
DARDLASITE SQKGKFTEAA KEFGPLNVQN EISGKATKPV SQGQESRP
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