| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1260 |
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| Symbol | |
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| ID | 6367690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1307139 |
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| End bp | 1308989 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642676658 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001951502 |
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| Protein GI | 189424325 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.126899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAAA AGGACAAATT ACTCGCAGAT GCCCAGAAAC TGATGCAAAA AGGGCAGGCC
GACAAGGCTA TCAACTGCTA TCAGGAAGCC CTGGCAACGG ACCCTGCTGA CCTGAGGGTG
CGTCAACGCC TTGCTGAACT GCTTGCCAAG TACCGCCGTG TCGATGAAGC ACGTAAAGAG
CTTGAAACCA TTGGCAAAAG CCTGACCGCA AACGGTTTCT ACATGAAGGC CATTGCGGTC
TACAAGCAGA TAGAAAAGCT GTTTCCGGAA GATATTGCCA TTGCCTTGAC TCTGGCAGGT
TTGAATGAAA AACATGGTCT CTCCGCCAAT GCGCTTTCCG AATATAAGCG GGCCTACGAC
CATTATGAAC GGCTGCAGAA CCATGTTGAA GCCTTAAAGG CACTTGAGGC CATGCAGCGG
ATAGATACCC ATAACCCCAA TATCAAGCTG AAGTATGCTG AGGTGCTGTT TCAGCAGGGG
CGGCTTGATG AAGCGCTGGA GGCGTTCAGG TCGCTTGGGC TGCTGCTGGT GGAACGACGG
GATGAGGCCG CCTTTTCGCG CCTTGCGGAG CGCCTGTCTC AACTTTTTCC GGACAAAGGG
GATTTTACCT GTTCGGTTAT CGAGCAAAAG ATCAGTGATG GCGGGGCAGA ACAGGCTGCG
GTCCTGCTGC AGGCACTGAT CAAGGCCGAT CCACAACGTC TGTCTGCCTG GCAGCTGTTG
GTGAAGGCAT ATCGTGCGCT TGAGAATACT GCCCGTCTCA AGACGGTCTG CCAGCATTTT
ATCAAATTTT TCCCATCAGA GCTGTTTCCC CGTGAGCAGT TGATCCGTGC CCTGCTGGAC
GAGCAGGAGA CCTCTGCGGC ATTAACCCTG ATGGATGAGA GCGAACAACT CTTTATTGCC
GCCGGCGCTG CGGGAACACT GCGTGAATTT TACCTGGCTC TGAACGATCT GGTGCCGATC
AACGTCCGTA TCCTGAAAGG CTGTGCCCGG GCATGTGAAG CTGCCGGCAT GAGTGAAGAA
GCCGCTTCCT TTGCCGCCAA GATCGGTTCA CTGGCAGGCC TGGGGGGAGG GCAACCGGCA
GTTGCAGTGC CTGCTGAAGA AGAGCTGGCT GCTGACGAGA TAGAAGAACT GCTGCCGGAG
GTGGAGCCTG AGATCGAACT GGAGATGCAG GCTGTCGGAC AGGCTGAAGA GGGTGTTTCG
CCGGCAGCAA CCCATGGCAC GGGCCCGCGC GAACTGGATA TCAGTGACTT CAGTGTTGCC
AAGGCTTCAC TTGAGGCTGA TTTTTATGAG ATTGAAGTGG AGTTGGACGA AGATCTGGGG
GCTGCAGCCG TTGCTCCGGC AGATACCTGG TTTGAAACGG TTAACGATAT ATTTGACAAC
ATTCAGACCG AGACCGGCAA GGTCCGCTTT GGCGCAGGAA TGGAAAATGG TGATGCCCAG
TCCCAGTATG ACCTGGGGTT GGCCTTCCAT GAGATGGGGC TTTATGATGA GGCGATCAAT
GCCTTGCGTC AGGCTGCAGA AGATCCTGAA CGCCGTGTCT CCTGCCTGAT CCTGCAGGGT
GCCTGTCTCA GGGATAAGGG GGAGCTGCAG CTGGCAGAGA ATGCGCTGCG CGCATTGCTC
ACGTTGCCCT CACTCTCTAC TGAGGATAGT TGTGCGCTTA AGTATGAGCT GGCGTTGACC
CTGACTGTTG TAGGCAAAAA CGATGAGGCC TGGACACTTT TGGAGGAGGT GGAGCGGATA
AATCCTGCCT ACCGCGATGT TTCTGCACGT CTGCATGATG CTTCAGAAGG GAAGAGTGTC
GGAGGGCTTG ACTTCAGTGA GGATGAGTTG CTGGACTTTG AACTGAAATA G
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| Protein sequence | MSKKDKLLAD AQKLMQKGQA DKAINCYQEA LATDPADLRV RQRLAELLAK YRRVDEARKE
LETIGKSLTA NGFYMKAIAV YKQIEKLFPE DIAIALTLAG LNEKHGLSAN ALSEYKRAYD
HYERLQNHVE ALKALEAMQR IDTHNPNIKL KYAEVLFQQG RLDEALEAFR SLGLLLVERR
DEAAFSRLAE RLSQLFPDKG DFTCSVIEQK ISDGGAEQAA VLLQALIKAD PQRLSAWQLL
VKAYRALENT ARLKTVCQHF IKFFPSELFP REQLIRALLD EQETSAALTL MDESEQLFIA
AGAAGTLREF YLALNDLVPI NVRILKGCAR ACEAAGMSEE AASFAAKIGS LAGLGGGQPA
VAVPAEEELA ADEIEELLPE VEPEIELEMQ AVGQAEEGVS PAATHGTGPR ELDISDFSVA
KASLEADFYE IEVELDEDLG AAAVAPADTW FETVNDIFDN IQTETGKVRF GAGMENGDAQ
SQYDLGLAFH EMGLYDEAIN ALRQAAEDPE RRVSCLILQG ACLRDKGELQ LAENALRALL
TLPSLSTEDS CALKYELALT LTVVGKNDEA WTLLEEVERI NPAYRDVSAR LHDASEGKSV
GGLDFSEDEL LDFELK
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