Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1245 |
Symbol | |
ID | 6368114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1294329 |
End bp | 1295072 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642676643 |
Product | hypothetical protein |
Protein accession | YP_001951487 |
Protein GI | 189424310 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.136267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGCC ATAATAAATG GAGTACCATC AAGCACAAAA AAGGGGCCGC TGATGCCAAG CGCGGCAAGA TCTTTACCAA GATCATCAAG GAAATCTCCG TTGCGGCCAA GCTCGGCGGC GGCGACCCGG CTGCAAACCC TCGCCTGAGA ACGGCTATTG ATAAGGCCAA GGGCGAAAAT ATGCCCAAGG ACAATATTGA ACGTGCCATT AAAAAAGGTA CCGGTGGTAT GGAAGGGGTT GTCTACGAGG AGATCGTGTA TGAGGGCTAC GGTCCCGGCG GCGTGGCGGT GCTGGTTGAG GTGATGACTG ATAACCGTAA CCGTACGGTT TCTGAAGTGC GCAGTATCTT TACCAAGTGC AACGGTAACA TGGGTGAAGC CGGCTGTGTA GCCTGGATGT TTGATAAGAA AGGTGTGATC AGCTACGACA CCTCTCTGGA TTTTGATCAG CTGTTCGAGG CGGCCCTTGA GGCTGGTGCC GAGGATGTGG TTGAAGAGGA TGAGCAGATT GAGGTGTACA CGGAACCGTC CAGCTTCATT GAGGTGCGCG ATGCGCTTGA GGCAAAAGGC TTCAAGTTCC AGAGTGCGGA GATCACCATG ATCCCTCAGA CTCAGGTGGC CCTTGAGGGC AAGCAGGCTG AAAGCATGTT GAAGATGATG GACCGGCTTG AAGATTGCGA TGATGTCCAG AATGTGTATG CAAACTTTGA TATCTCGGCG GATGAGATGG AAAAGATGAT GTAA
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Protein sequence | MSGHNKWSTI KHKKGAADAK RGKIFTKIIK EISVAAKLGG GDPAANPRLR TAIDKAKGEN MPKDNIERAI KKGTGGMEGV VYEEIVYEGY GPGGVAVLVE VMTDNRNRTV SEVRSIFTKC NGNMGEAGCV AWMFDKKGVI SYDTSLDFDQ LFEAALEAGA EDVVEEDEQI EVYTEPSSFI EVRDALEAKG FKFQSAEITM IPQTQVALEG KQAESMLKMM DRLEDCDDVQ NVYANFDISA DEMEKMM
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