Gene Glov_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_1243 
Symbol 
ID6366012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp1291313 
End bp1293571 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content59% 
IMG OID642676640 
Productribonuclease R 
Protein accessionYP_001951485 
Protein GI189424308 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID[TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0149067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCTGC ACAAAAAAGA GATACTGAAC CTGCTGGCTG AAGAACCCGA GGCACTGCAC 
TTTGCCTCAC TGCTCCGCGC CTTTGGCGGC CGCCATATCA AAAACGAGCT CAAGCAGATT
GTGGATGACC TGGTACGCAG TGGCGAGATC CTGCGTCTGC GGGGCAACCG TTATACCCTG
CCGGGAGCCG ACAACAGCGG CACCGTGCAG GGCAGCATCT CGATTCACCG CGATGGGTAC
GGCTTTGTCA AGCCTGAGAG CGGCGGCGAG GACATCTTTA TCCCGGGCAA GAACATCAAT
AACGCCCTGC ATGGTGACAA GGTATCGGTC AGGGCCGAGA AGAGCCGCTC CCAGCGCGGC
AAGCTGGAAG GCCGGGTGGT TGCCGTACTG GAACGGGCCA ACAGCCGGAT TGTGGGGCGC
CTGCAGCAAA GCAGGCGTGG CGCAACCGTG GTTCCGGAAG AGTTGCGGAT CGGCACCTTC
TTCACCGTAC CGGCCAATGC AGTCAATGGC GCGGTTGATG GGCAGCAGGT GGTGATTGAA
GTGACCGCCT GGCCGGTCGG GGGGCGTCCG CCCGAAGGCA AAGTGGTTGA AATCCTGGGC
TGGCCCGACG ACCCTGATGT TGAAGTACAG ACGGTGATCC GCAAGTTTGA TCTGCCCCAC
ACCTTTGAAC CGGAGACGCT GGCAGAGGCC CAGGCAATCC CCTCTCAGGT CGGCAAAAAC
GATCTGAAGG ACCGGGTTGA CCTGCGCAAG CTGCCCACCG TGACCATTGA CGGAGAAACG
GCCAAAGACT TTGACGATGC CGTTTCCATC CGGCAGGAAG GTCATAATTT CCGGCTCTGG
GTATCCATTG CCGATGTTTC ACACTACATT GAACCGGGGA GCATGCTTGA TCGCGAGGCC
TACCTGCGCG GCACGTCGGT CTACTTTCCG GACCGTTGCA TCCCGATGCT GCCGGAACGC
CTCTCAAACG GCATCTGCTC CCTGAATCCC CACCTGGACC GGCTGACCAT GACCGCCGAG
ATGCTCTTTG ACCAACAGGG CAGGATGCTT GAATCCAGCT TCTATTCCAG CGTGATCAAG
AGCGATGCCC GCCTGACCTA TACCAAGGTC AAGCAGGTCA TCATCGACGG CGATGAAAAG
GTACTTGAAG AGGATCGCGG CCTGGCTCCG ATGCTGTTGC AGATGAAAGA GCTGGCCCTG
ATTCTGCAGA CGATGCGCAG GCAACGGGGC AGCATCGACT TTGACCTGCC GGAACCGGAG
ATCATCCTCG GCCTGACCGG CCAGACCGAG GCGATCATCA AGAGTGAGCG CAATCTGGCC
CACCAACTGA TTGAAGAGTT CATGCTGGCT GCCAACGAGG CCGTAGCACG CTTTGTGTCC
GGGCAGGAGA TGGCATTCAT CTACCGGGTC CATGAGCCGC CTGACCCAAC CAAGCTGACC
GCCTTCCGTG ACTTTATCCT TCCCTTTGGC TTCACTCTGG AGATGCAGGG GGATCGGGTT
GAGCCATCAG CCATGCAACG CTTGATCAGC GATGCAGAGG GTAAGCCGGA AGAGCGGCTG
GTTAACTACG GCCTGCTGCG TTGCATGAAG CAGGCCCGCT ATGCTGCTGA AAATCTGAAG
CACTTTGGCC TGGCCTCCAG CTGCTACACC CACTTTACCT CGCCGATCCG GCGCTATCCC
GACCTGATTG TCCACCGTCT GCTCCGGTTG GCACTGGAGC GCAAAGCCGG GACACTGGGC
AAAAAAGGAC AGCGCGAACT GGACCGGATA GGCAGTACCC TTTCCGAAGC GGCCGAGCAT
ACCAGCACCC GTGAACGGGT AGCCATGGAG GCAGAACGGG ATATTGTCGA GCTGAAAAAA
CTGCAGTTCA TGCAGGGCAG GATCGGCCAG GAGTTTGACG GCTTTATCGC CGGGGTGGCC
GGTTTCGGCT GTTTCGTAGA ACTGTCCGAG GTCTTTGTGG AAGGACTGGT ACATATTTCC
ACCCTGGCGG ACGACCTCTA CAACTTTGAT GAACAAAACC ACGCACTGAT CGGCCGGCGT
TCCGGACGCA CCTTGCGGAT CGGCGACCCT GTCCGGGTAC GGGTGGTGGC GGTCAATCCT
CAGGCCCGCA GAATCGAGTT TGTACTGGAA AGCCACAGCA CAGTCCGCAG GGACGTGGCT
GCGGCACAAC CGGCTGCCCC AGAGGAGTAT CCACGCATTC CGATCAGGGG AAAGCGTCCG
GTGCCGAAGG GCGCCGGCAA CGGAAATCGC CGGCGTTAG
 
Protein sequence
MLLHKKEILN LLAEEPEALH FASLLRAFGG RHIKNELKQI VDDLVRSGEI LRLRGNRYTL 
PGADNSGTVQ GSISIHRDGY GFVKPESGGE DIFIPGKNIN NALHGDKVSV RAEKSRSQRG
KLEGRVVAVL ERANSRIVGR LQQSRRGATV VPEELRIGTF FTVPANAVNG AVDGQQVVIE
VTAWPVGGRP PEGKVVEILG WPDDPDVEVQ TVIRKFDLPH TFEPETLAEA QAIPSQVGKN
DLKDRVDLRK LPTVTIDGET AKDFDDAVSI RQEGHNFRLW VSIADVSHYI EPGSMLDREA
YLRGTSVYFP DRCIPMLPER LSNGICSLNP HLDRLTMTAE MLFDQQGRML ESSFYSSVIK
SDARLTYTKV KQVIIDGDEK VLEEDRGLAP MLLQMKELAL ILQTMRRQRG SIDFDLPEPE
IILGLTGQTE AIIKSERNLA HQLIEEFMLA ANEAVARFVS GQEMAFIYRV HEPPDPTKLT
AFRDFILPFG FTLEMQGDRV EPSAMQRLIS DAEGKPEERL VNYGLLRCMK QARYAAENLK
HFGLASSCYT HFTSPIRRYP DLIVHRLLRL ALERKAGTLG KKGQRELDRI GSTLSEAAEH
TSTRERVAME AERDIVELKK LQFMQGRIGQ EFDGFIAGVA GFGCFVELSE VFVEGLVHIS
TLADDLYNFD EQNHALIGRR SGRTLRIGDP VRVRVVAVNP QARRIEFVLE SHSTVRRDVA
AAQPAAPEEY PRIPIRGKRP VPKGAGNGNR RR