Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1243 |
Symbol | |
ID | 6366012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 1291313 |
End bp | 1293571 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642676640 |
Product | ribonuclease R |
Protein accession | YP_001951485 |
Protein GI | 189424308 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0149067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCTGC ACAAAAAAGA GATACTGAAC CTGCTGGCTG AAGAACCCGA GGCACTGCAC TTTGCCTCAC TGCTCCGCGC CTTTGGCGGC CGCCATATCA AAAACGAGCT CAAGCAGATT GTGGATGACC TGGTACGCAG TGGCGAGATC CTGCGTCTGC GGGGCAACCG TTATACCCTG CCGGGAGCCG ACAACAGCGG CACCGTGCAG GGCAGCATCT CGATTCACCG CGATGGGTAC GGCTTTGTCA AGCCTGAGAG CGGCGGCGAG GACATCTTTA TCCCGGGCAA GAACATCAAT AACGCCCTGC ATGGTGACAA GGTATCGGTC AGGGCCGAGA AGAGCCGCTC CCAGCGCGGC AAGCTGGAAG GCCGGGTGGT TGCCGTACTG GAACGGGCCA ACAGCCGGAT TGTGGGGCGC CTGCAGCAAA GCAGGCGTGG CGCAACCGTG GTTCCGGAAG AGTTGCGGAT CGGCACCTTC TTCACCGTAC CGGCCAATGC AGTCAATGGC GCGGTTGATG GGCAGCAGGT GGTGATTGAA GTGACCGCCT GGCCGGTCGG GGGGCGTCCG CCCGAAGGCA AAGTGGTTGA AATCCTGGGC TGGCCCGACG ACCCTGATGT TGAAGTACAG ACGGTGATCC GCAAGTTTGA TCTGCCCCAC ACCTTTGAAC CGGAGACGCT GGCAGAGGCC CAGGCAATCC CCTCTCAGGT CGGCAAAAAC GATCTGAAGG ACCGGGTTGA CCTGCGCAAG CTGCCCACCG TGACCATTGA CGGAGAAACG GCCAAAGACT TTGACGATGC CGTTTCCATC CGGCAGGAAG GTCATAATTT CCGGCTCTGG GTATCCATTG CCGATGTTTC ACACTACATT GAACCGGGGA GCATGCTTGA TCGCGAGGCC TACCTGCGCG GCACGTCGGT CTACTTTCCG GACCGTTGCA TCCCGATGCT GCCGGAACGC CTCTCAAACG GCATCTGCTC CCTGAATCCC CACCTGGACC GGCTGACCAT GACCGCCGAG ATGCTCTTTG ACCAACAGGG CAGGATGCTT GAATCCAGCT TCTATTCCAG CGTGATCAAG AGCGATGCCC GCCTGACCTA TACCAAGGTC AAGCAGGTCA TCATCGACGG CGATGAAAAG GTACTTGAAG AGGATCGCGG CCTGGCTCCG ATGCTGTTGC AGATGAAAGA GCTGGCCCTG ATTCTGCAGA CGATGCGCAG GCAACGGGGC AGCATCGACT TTGACCTGCC GGAACCGGAG ATCATCCTCG GCCTGACCGG CCAGACCGAG GCGATCATCA AGAGTGAGCG CAATCTGGCC CACCAACTGA TTGAAGAGTT CATGCTGGCT GCCAACGAGG CCGTAGCACG CTTTGTGTCC GGGCAGGAGA TGGCATTCAT CTACCGGGTC CATGAGCCGC CTGACCCAAC CAAGCTGACC GCCTTCCGTG ACTTTATCCT TCCCTTTGGC TTCACTCTGG AGATGCAGGG GGATCGGGTT GAGCCATCAG CCATGCAACG CTTGATCAGC GATGCAGAGG GTAAGCCGGA AGAGCGGCTG GTTAACTACG GCCTGCTGCG TTGCATGAAG CAGGCCCGCT ATGCTGCTGA AAATCTGAAG CACTTTGGCC TGGCCTCCAG CTGCTACACC CACTTTACCT CGCCGATCCG GCGCTATCCC GACCTGATTG TCCACCGTCT GCTCCGGTTG GCACTGGAGC GCAAAGCCGG GACACTGGGC AAAAAAGGAC AGCGCGAACT GGACCGGATA GGCAGTACCC TTTCCGAAGC GGCCGAGCAT ACCAGCACCC GTGAACGGGT AGCCATGGAG GCAGAACGGG ATATTGTCGA GCTGAAAAAA CTGCAGTTCA TGCAGGGCAG GATCGGCCAG GAGTTTGACG GCTTTATCGC CGGGGTGGCC GGTTTCGGCT GTTTCGTAGA ACTGTCCGAG GTCTTTGTGG AAGGACTGGT ACATATTTCC ACCCTGGCGG ACGACCTCTA CAACTTTGAT GAACAAAACC ACGCACTGAT CGGCCGGCGT TCCGGACGCA CCTTGCGGAT CGGCGACCCT GTCCGGGTAC GGGTGGTGGC GGTCAATCCT CAGGCCCGCA GAATCGAGTT TGTACTGGAA AGCCACAGCA CAGTCCGCAG GGACGTGGCT GCGGCACAAC CGGCTGCCCC AGAGGAGTAT CCACGCATTC CGATCAGGGG AAAGCGTCCG GTGCCGAAGG GCGCCGGCAA CGGAAATCGC CGGCGTTAG
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Protein sequence | MLLHKKEILN LLAEEPEALH FASLLRAFGG RHIKNELKQI VDDLVRSGEI LRLRGNRYTL PGADNSGTVQ GSISIHRDGY GFVKPESGGE DIFIPGKNIN NALHGDKVSV RAEKSRSQRG KLEGRVVAVL ERANSRIVGR LQQSRRGATV VPEELRIGTF FTVPANAVNG AVDGQQVVIE VTAWPVGGRP PEGKVVEILG WPDDPDVEVQ TVIRKFDLPH TFEPETLAEA QAIPSQVGKN DLKDRVDLRK LPTVTIDGET AKDFDDAVSI RQEGHNFRLW VSIADVSHYI EPGSMLDREA YLRGTSVYFP DRCIPMLPER LSNGICSLNP HLDRLTMTAE MLFDQQGRML ESSFYSSVIK SDARLTYTKV KQVIIDGDEK VLEEDRGLAP MLLQMKELAL ILQTMRRQRG SIDFDLPEPE IILGLTGQTE AIIKSERNLA HQLIEEFMLA ANEAVARFVS GQEMAFIYRV HEPPDPTKLT AFRDFILPFG FTLEMQGDRV EPSAMQRLIS DAEGKPEERL VNYGLLRCMK QARYAAENLK HFGLASSCYT HFTSPIRRYP DLIVHRLLRL ALERKAGTLG KKGQRELDRI GSTLSEAAEH TSTRERVAME AERDIVELKK LQFMQGRIGQ EFDGFIAGVA GFGCFVELSE VFVEGLVHIS TLADDLYNFD EQNHALIGRR SGRTLRIGDP VRVRVVAVNP QARRIEFVLE SHSTVRRDVA AAQPAAPEEY PRIPIRGKRP VPKGAGNGNR RR
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