| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1213 |
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| Symbol | |
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| ID | 6368108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1259051 |
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| End bp | 1260406 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642676610 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001951455 |
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| Protein GI | 189424278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAA AGATAATTTT GCCCGAGGAT AAACTCCCCA CCCAATGGTA CAACATCATC
CCTGACCTGC CAGGTCCGCT GGCACCGGTT ATCTCCCCAC GTACCGGAGA GCCGGTCACC
CCGGAAGAGC TGCTGGCGAT CTTTCCGCCT GCCATTCTGG AGCAGGAGAT GTCCAATCAG
CGCTGGATCG ACATCCCTGA GCAGGTGCGT GACATCTATA CCATGTGGCG GCCATCCCCG
ATGTTCCGGG CTCACCGCCT GGAAAAGGCG CTGGGCACGC CGGCCAAGAT CTACTACAAG
TACGAAGGGG TCTCACCGGC CGGCTCACAC AAGCCTAACT CGGCTATCCC CCAGGCCTTT
TACAACAAGC AGGCCGGGAT CAAGCGGCTG GCCACCGAGA CCGGCGCCGG TCAATGGGGC
AGTTCCCTGT CACTGGCCTG TTCCCTGTTC GGTCTGGAAT GTACGGTCTA CATGGTCAAG
GTTTCCTACT TCCAGAAGCC GTACCGCAAA TCCATGATGC AGATGTGGGG CGCCACGGTG
TACCCCTCCC CCTCTGAAAT GACCGAGGCA GGCCGCGCTG CTCTGGCCGA AAACCCGGAC
TCCAACGGCA GCCTCGGACT GGCCATCTCT GAGGCGGTGG AGGATGCCGC TACCCACAAT
GATACCAACT ATGCCCTGGG CAGCGTGCTG AACCATGTCT GCATGCATCA GACCGTGATC
GGCCTGGAGG CGCTGGAGCA GTTCAAGATG GTGGGAGACT ACCCGGATGT GGTGATCGCC
TGCTGCGGCG GCGGCTCCAA CTTCGCCGGT CTGGCCTTCC CGTTCCTGTC TGAAAAGGCC
AATGGCAAAA AGGTACGCTG CCTGGCGGTG GAACCGGCCT CCTGCCCTAC CCTGACCAAA
GGTGTCTATG ACTTTGACTA CGGCGACACC GCCAAGCTGG GACCGATTGC CAAGATGTAC
ACCCTGGGCC ATGACTTCAT GCCGCCCGGC ATCCATGCCG GTGGTCTGCG CTACCACGGC
GAGTCTCCGC TGGTTTCCCA ACTCTATGCA GCCGGCCTGA TCGAGGCCCG TTCCCTGATG
CAGACCGCCT GCTTTGAAGG GGCCCTGCTG TTTGCCAAGA ACGAGGGGAT TGTACCGGCG
CCGGAATCAT CCCACGCCGT CAGGGCAGCC ATTGATGAGG CGCTGCTGGC CAAGGAAGAG
GGCAAGGAAC GGACCATCCT GTTCAACCTG TCCGGCCACG GCTTCATGGA TATGACCGCC
TATGACAACT ACCTGGCCGG CAACCTGGAA GACTACGAGT ATCCGGCAGA GATGGTGCAG
GAGTCATTAA AGCATCTGCC GAAGGTGAAA CTCTAG
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| Protein sequence | MQTKIILPED KLPTQWYNII PDLPGPLAPV ISPRTGEPVT PEELLAIFPP AILEQEMSNQ
RWIDIPEQVR DIYTMWRPSP MFRAHRLEKA LGTPAKIYYK YEGVSPAGSH KPNSAIPQAF
YNKQAGIKRL ATETGAGQWG SSLSLACSLF GLECTVYMVK VSYFQKPYRK SMMQMWGATV
YPSPSEMTEA GRAALAENPD SNGSLGLAIS EAVEDAATHN DTNYALGSVL NHVCMHQTVI
GLEALEQFKM VGDYPDVVIA CCGGGSNFAG LAFPFLSEKA NGKKVRCLAV EPASCPTLTK
GVYDFDYGDT AKLGPIAKMY TLGHDFMPPG IHAGGLRYHG ESPLVSQLYA AGLIEARSLM
QTACFEGALL FAKNEGIVPA PESSHAVRAA IDEALLAKEE GKERTILFNL SGHGFMDMTA
YDNYLAGNLE DYEYPAEMVQ ESLKHLPKVK L
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