Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1115 |
Symbol | |
ID | 6367592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1167277 |
End bp | 1169394 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642676510 |
Product | TonB-dependent receptor |
Protein accession | YP_001951357 |
Protein GI | 189424180 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA GGACGTCGGT TCTATGCGTA TCTTTTATGT TGTGCCTGGG GGCTGGCACA GTGGTTCAGG GGGCTGATGC CCCTCTGGCC CAGCCGGATA CGGTTGTAGC CCTCAATAAT CCGTCTGAGA GCAAAGAGCT GCTCATGTTT TTTGAGGAGC AAGACCTGGT TACCGCCACC AAACGTCCCA CCTCATTACG CAAAGCCCCT GCTATCGCTA CGATCATAAC CGCCGACGAG ATCAGAAACA TGGGAGCCCG CAATCTGCTG GATGTACTGA AGATGGTGCC TGGCTTCGGT GTTTCCATCA CCGAGTTTGG CGGGAATATG GTCGAGGTAC GTGGCATCAG ATCTTCGCTC AGTGAAAAAA TTCTGGTCAT GATCGACGGT CATTCTCTGA ATAGAAATTT TACCGGAAGC GCCTTGTACC GTGTGGCAGG TATGCTCCCG ATGGAGAACA TCAAGCAGGT GGAGGTGGTA CGCGGGCCGG GCTCTGCTCT CTACGGTACC AGCGCCTTTG TGGCAACCAT CAATATCATT ACCCGCACTG CCGAGGAAAT AGACGGCTTT GAGGCCAAGG CCGGCGGAGG GAGTTTTGAC AGCTTCAAGG GTAACCTGCT TGGCGGTAAG ACGATTGGTG ATAATCTTAC CGTTGTGGGC AGTCTGGATC ATTATCAGTC GCAAGGCGCA AAGCTGAGCG TTGGCGCTGA TACGCTGACC GGCACACCGT TTTCAAAAGC CCCCGGTACA CCTGATCTTT ACTTTAAGCA GACAGATGCC TTCCTGAAGG TCGGCTATGG TGATCTCTCC TTTCGAGGCC ACTATCTTAC CAAACAGGAG GGGATGTATG TAGGTATTGT ATCCGCCCTC ACGGACGATT CCAGTAAAGC CCAGGTTGAT AACTATTGGG GTGAGCTGGC TTACAACCTG AAGCTGACAG ATGATTTTTC AGCGAACCTG AAGCTTTATT ACGATTATTT TGAGCAGGAC CCCACCATGA AGATCTACCC GAACGGATTT ATGGGCCTCT TTCCGAACGG GATGATCGGC AAACCGCTGG TAAAGAATCG TACCATTGGC GGGGAGTTAC AGACGGATTG GGATCTGTTC TCGGGAAACC ATCTGATTGC CGGGGTTTCC TTTGAGGAAA TGCGTCAGTA TGATGTTCAG CAACTGGCCA ACTTCAATCC GTTGACCGGT GCGCCGCTTG CTTCTGTTCA GGAGGTGGCT AACTGGAACA AGAATGTGAC CCGCCAGGTC TTTGCCGCCT ATCTTCAGGA TGAATGGCAG CTGCCGGCTC AAATCAACCT GACTGCCGGT CTGCGTTATG ACCACTACAG TGATTTTGGA GATACCATAA ATCCGAGAGT AGGGCTGGTT TGGAGCTTTC TGGAGGATGC CGATCTGAAA CTGCTGTATG GTCAGGCGTT CCGAGCCCCA AACTTTCAAG AACTGTACAA TATCAACAAT GCAACGGTGA TCGGCAACCC AAACCTCAAA CCTGAACGGA TTCAGACCTA CGAGGCTGGC GTGGCCTGGC GTTTAAACCG CTACTTTGCA GCGAACCTGA ACTACTTTAT CAGCACTATC GATGATCAGA TCGGTTGGGT CCCTTCAACC ACAGCAGGCC AGCCTGCGCT CAATGCCAAT ATCGGTAAAA CCGAGACACA AGGGGTTGAG CTGGGATGTA ACGGATCACT GGGGACCGAC CTGTATTGGA AGCTGAACTA TACCTATCAG GACCCGCGTG ATATCAGCAA TAATAAACGA CTGCCCTATG TGCCGTCGCA GCGTGTCTCC GGCAGTATCA ACTACGCCTT GACCAAATAC CTGAACCTGC ATACCGACCT GCTCTGGACC GGAGTGCGTC CACGGGATAC AGGCGACACC AGGCCGCAGA TGCCCTCCTA TACGACGGTT GATCTGGCCG CGACACTTAA AAACTTCTAT AAAACCTTGG AAATACAAGC AACGATCCGG AATCTCTTTG ACCAGCGCTA CAAAGATCCT GATACCTCCG GGGGAGCGGT AAACCTTACA AAGACGGCAC CGAAGGTTCC CGGAGATTTT CCCCGTGAAG GGATATCCGG GTTTGTGACT GTGTCATACC GGTTTTAG
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Protein sequence | MKKRTSVLCV SFMLCLGAGT VVQGADAPLA QPDTVVALNN PSESKELLMF FEEQDLVTAT KRPTSLRKAP AIATIITADE IRNMGARNLL DVLKMVPGFG VSITEFGGNM VEVRGIRSSL SEKILVMIDG HSLNRNFTGS ALYRVAGMLP MENIKQVEVV RGPGSALYGT SAFVATINII TRTAEEIDGF EAKAGGGSFD SFKGNLLGGK TIGDNLTVVG SLDHYQSQGA KLSVGADTLT GTPFSKAPGT PDLYFKQTDA FLKVGYGDLS FRGHYLTKQE GMYVGIVSAL TDDSSKAQVD NYWGELAYNL KLTDDFSANL KLYYDYFEQD PTMKIYPNGF MGLFPNGMIG KPLVKNRTIG GELQTDWDLF SGNHLIAGVS FEEMRQYDVQ QLANFNPLTG APLASVQEVA NWNKNVTRQV FAAYLQDEWQ LPAQINLTAG LRYDHYSDFG DTINPRVGLV WSFLEDADLK LLYGQAFRAP NFQELYNINN ATVIGNPNLK PERIQTYEAG VAWRLNRYFA ANLNYFISTI DDQIGWVPST TAGQPALNAN IGKTETQGVE LGCNGSLGTD LYWKLNYTYQ DPRDISNNKR LPYVPSQRVS GSINYALTKY LNLHTDLLWT GVRPRDTGDT RPQMPSYTTV DLAATLKNFY KTLEIQATIR NLFDQRYKDP DTSGGAVNLT KTAPKVPGDF PREGISGFVT VSYRF
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