| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1114 |
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| Symbol | |
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| ID | 6367589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1165519 |
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| End bp | 1167207 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642676509 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_001951356 |
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| Protein GI | 189424179 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTG CGGAAGTGAT CGTCAGGTCT TTGGAAAAAC ATGGTGTTAC CTGTGTGTTT
GGTGTCCCTG GCGGTGCTAT TGAGTCACTT AATACGGCCC TGTACAAGAG CTCGATCTCG
GTGATTGTGG CAAAGCATGA GGAAGGGGCC GCTTTTATGG CTGATGGGTA TGCCCGGGTG
AGCGGCGTTA TTGCGGTTTG TTGCAGTACT GCCGGTCCAG GGGCAACCAA TATGATTACC
GGCATAGCCT CAGCTTTTGG AGACTCCATT CCGGTCATTG CGTTAACCGG TCAGGTCTCT
ACCTCATTGT TCGGCAAGGG GGCCATTCAG GAATTTTCAG TTCAGAGCTT CGGCATTGTC
AGCATTTTCC GGCAGATCAC CAAATACAGC GACATCATTA TAAATGAGAA CAAAGCGGGC
GAGATGATCT CCAGGGCACG CCGGTTGGCC TTAACCGGCA GAAAGGGACC TGTCCATCTT
AATCTTCCTG CCGATATCAT GAAGCGCAAG GTGACCGATG ACAGTCATGA ACGTTGCAGC
ACTACGCAGG TGTTGGGGTT TGACAGGGAG GCCGTTAAAA AGGCTGCGCA ACTTCTTCTT
GGTGCCAAGC GGCCGGTGAT AGTTGCCGGC TGGGGGACTG TCCTTTCACG GGCTGACAAA
GAACTGTTGG AACTTGCCGA GCTGCTGGAT ATCCCTGTGG CTACATCGCC AAAAGCAAAG
GGGATACTGA GTGAGGTGCA TCCGCTCTCA CTGGGGGTGC TTGGATTTGC GGGATCGCCG
GTTGCGAAGG AATATATCCT CAAAAGGGAT GTTGATGTGC TGCTTGCGGT GGGCACCAGT
TTCAATGAAT TTGTGACCTC GGGCTGGGAT AAACGGCTGC TGCCGATGAA GTCCTTGATC
CATGTGGATA TTGACTGCAA TGAGATCGGC AAAAACTACT ATGTGCATGT CGGCATTGCA
GGCGATGCTG CCACTGTTCT GCGTGAGCTT GTTTTTGAGA TAGGCAGAAT CAGGAAAGGC
AGGCGTATAG AAAACACCAG GCGTAAAGAG GTTGAACAGG TCAGGGCCGC TTTGCTGGTA
AAAACGAGAA AGCAAAATAA AGCATTGTAC AGTCCGCACC GCCTGATTAT GGACCTGAAC
GAGGCCTTGC CAAAAAATAC GCTCTATTTT GCGGATAACG GCAACAGTAT GGCCTGGGCA
ATTCGCTATT TGACGATAAC TGAACCCTAT TCATTTTATG TCGGCCTCGG TTTCGCCTCG
ATGGGGTTTG CTGTCGCGGC GCCGATCGGG GCCAAGCTTG CAGCAGGAGA CAGGCCGGTT
GTCGCCCTGG TGGGTGATGG TTCTTTCCTG ATGAACGGCA TGGAGGTCGC CACGGCAGTT
AATTACAATA TTCCGGTTAT CTGGGTGATC ATGAATAACG CCATGCTGGG AATGGTGTAC
CACGGCAGAA AGCTTGCCGG GATTCCGGAG GGGATTCCGT CAGGGTTTAA GCCGGTTGAC
CATGTCAAAC TGGCAGAGGC ATTAGGCGCC CGGGGGATCA GAATTACGAC GCCGGGGGAA
ATAAACCGGG AATTGATGGA TGACATACTT GCAGCCGGGG TTCCGACCGT ACTGGATGTC
ATTATCGATC CGGAAGAGGT TCCACCCATA CATTCCCGCA TTTCTTCACT GGAAAAACTT
TACACATGA
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| Protein sequence | MNAAEVIVRS LEKHGVTCVF GVPGGAIESL NTALYKSSIS VIVAKHEEGA AFMADGYARV
SGVIAVCCST AGPGATNMIT GIASAFGDSI PVIALTGQVS TSLFGKGAIQ EFSVQSFGIV
SIFRQITKYS DIIINENKAG EMISRARRLA LTGRKGPVHL NLPADIMKRK VTDDSHERCS
TTQVLGFDRE AVKKAAQLLL GAKRPVIVAG WGTVLSRADK ELLELAELLD IPVATSPKAK
GILSEVHPLS LGVLGFAGSP VAKEYILKRD VDVLLAVGTS FNEFVTSGWD KRLLPMKSLI
HVDIDCNEIG KNYYVHVGIA GDAATVLREL VFEIGRIRKG RRIENTRRKE VEQVRAALLV
KTRKQNKALY SPHRLIMDLN EALPKNTLYF ADNGNSMAWA IRYLTITEPY SFYVGLGFAS
MGFAVAAPIG AKLAAGDRPV VALVGDGSFL MNGMEVATAV NYNIPVIWVI MNNAMLGMVY
HGRKLAGIPE GIPSGFKPVD HVKLAEALGA RGIRITTPGE INRELMDDIL AAGVPTVLDV
IIDPEEVPPI HSRISSLEKL YT
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