| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1085 |
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| Symbol | |
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| ID | 6368171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 1133142 |
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| End bp | 1134104 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642676481 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD family |
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| Protein accession | YP_001951328 |
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| Protein GI | 189424151 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0522379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCTTG ACACGCCCCG CCAGGAGCCG TTTCTGGATG CACCAGGTCT GGATGACGAA
CAGGAACCGC CGGTTGACTT TGTTGCCGCC ATTGAAGCGG AAGAAGACAC CACACTTGAA
GTTGACGACC TGCCGGCCCT GGTGGAACAG ATTCCCCTTG ATGATCCGGT CAAGATCTAC
CTGCGGGATA TCCAGCGTAC CCCCTTGTTG AACGCAGAAG CCGAGAAGGA ACTGGCCCGT
CGGGTTGAAC AGGGAGACAA AGCGGCCCGC AACCAGATGA TTGAGGCCAA CCTGCGGCTG
GTGGTCAAGA TTGCCAAGCG CTACCTGAAT CGCGGTCTGC CGTTCCTTGA CCTGATTGAA
GAAGGCAACC TGGGCCTGAT GAAGGCGGTC GAACGGTTCT CCCTAGAAAA GGAATGCCGC
TTTTCAACCT ACGCAACCTG GTGGATCCGT CAATCAATCG AACGCGCCCT GGTAAATCAG
TCTAGAACTA TCAGGCTTCC GGTCCATGTC TCTGACGATA TAAGTCGCAT GCTTAAGGTA
TCGCGCCAGC TTTCGCAGGA GCTGCACAGA GAACCGTCTG TTCAGGAACT GGCGGATGCC
ATGCAGATCA AGCCGCTGCA TATCCGCAAA CTGATGATCC TGCTGCGGCG GACCTGTTCC
ATGGATGTGC CGATTGGTGA GGGCAACGAC TTTTTCCTGG TGGACACCAT CGAAGACACC
AATGCGGTTT CACCCGCCGA TCTGCTTGAA AACATTGATC GCTATGAGCT GATAGCCGAG
CATTTTGATC AGCTGAGCGA GAACGAACGC ACCATTCTGG GGCTCCGCTT TGGCCTTGAT
GACCGGGACC CCCAGACTCT GGACACCATC GGCCAGAGTT TCGGCGTTAC CCGTGAAAGG
ATTCGCCAGA TCGAGGCAAA ATCACTCGAA AAACTAAAGG CCCTGGCCAA ATCATCGAAA
TAG
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| Protein sequence | MSLDTPRQEP FLDAPGLDDE QEPPVDFVAA IEAEEDTTLE VDDLPALVEQ IPLDDPVKIY
LRDIQRTPLL NAEAEKELAR RVEQGDKAAR NQMIEANLRL VVKIAKRYLN RGLPFLDLIE
EGNLGLMKAV ERFSLEKECR FSTYATWWIR QSIERALVNQ SRTIRLPVHV SDDISRMLKV
SRQLSQELHR EPSVQELADA MQIKPLHIRK LMILLRRTCS MDVPIGEGND FFLVDTIEDT
NAVSPADLLE NIDRYELIAE HFDQLSENER TILGLRFGLD DRDPQTLDTI GQSFGVTRER
IRQIEAKSLE KLKALAKSSK
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