Gene Glov_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_1062 
Symbol 
ID6368597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand
Start bp1101909 
End bp1104992 
Gene Length3084 bp 
Protein Length1027 aa 
Translation table11 
GC content57% 
IMG OID642676457 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001951305 
Protein GI189424128 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.782086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATCG GCAAAATCAA TAAATTTCGC CTGCAATGGG GGATACTGCT GTTTGGCTTG 
TTGTTGCTGG CCGGTGCTGT TATCCACAAT CTCTACCGGA ACTATGAGGA TATCCTGGAG
GCTGAGCAGC AGCGTCTGTT GACCCAGTCC CGCGTGATTG CCGTCAATGT AGCCAACCGC
CTGGAGAGTA CCGACAGGAT TCTGCGTCTG ATCCGGCGAG AGCTGGGCGC CTACTCTGAG
AAGGAGTGGT CCAGCCAGAT ACCGCACCAG CGCTTTGAAC TGATGGTGGA TGCGCTTTCC
GGGGTGCACA GCATGCTGGT GCTGGATGCC CGGGGAAAGG TTGTGATCAG CAATCACCGG
GAGGCACTGG GAAGCAATCT GGGGGGGCGC CCCTATTTTC AGGCTGCCCT GCGTGACCCA
AATCCGGAAA AACTTTATGT AACGCCGCCG TTCAAGACCC TGCCGGGAAC CTGGGGCATT
GCACTTGTGC GGGTTATCCT GAACAGCCAG GGGCAGTTTA GTGGTGTGGT GGTGGCAACC
CTTAACCCTG AATACTTCAA AGTGCTGCTG GGCTCGGTGC AGTATGCGCC GGATATGCGG
TCGTGCCTTG CCCATGGGGA TGGACTGCAA TTCATCATGG AGCCGGACCG TCTCGGGCAA
CAGGGTATGA ATCTGGCCAA ACCCGGTTCA TTTTTTACCC GTCACATGCA GAGCGGCAAA
AAGGAAAATG TGCTGAGCGG CACGGTCTAC TCCACCGGCG AACAGCGCTT GATGGCATTA
AGCACGGTGC AGCTTGCAGT ACTCGGCATG GACAGACCGC TGGTCATAGC GGTGAGTCGT
GACCTGAAGC AACTCCATGC CGGTTGGCAC AAACATGCGG TTAACCAGGC CATCACCTTC
AGTATCATCG TTGCTCTAAG TATCTCTGCC CTGATCGGTT TTCAGGGATA TCAGCGTGAA
CAGTTGGCAA AGGCCCGTGC CGTTGAACAG GCATTGCTTG ATGCTCGTCA GCAACTTAAT
GATATTATAG ACTTTTTCCC TGATGCGGTC TTTGTGATTG ATCGGAACAA GCGGGTGACG
ATCTGGAACC GGGCCATTGA GAAGATGTCC GGGGTACCAA AGGAGGAGAT GCTTGGCAAG
GGGGATCACG AATACAGCAT CCCGTTTTAC GGACAGCGCC GAACCCAGCT GCTTGACCTG
CTGGATCTGG ATGATGCCGA GCTGGCGGCG AAATACAGTA ATATCCGGCG TGTCGGAGAA
GTACTGGATG CCGAGACCTT TTGCCCGGCC CTGCATGACG GCAAAGGGGC CTATGTCTGG
GCCACCGGTG TACCGCTCTA TAATGCCGCC GGGGAACGGA TCGGAGCCAT TGAGGCGATC
CGGGACATCT CGGACCGCAA ACAGTCCGAA CTCTTCCTCA AGAAATTGAC CCACGGAATT
GAGAATAGCG CCAGCGCTGT TGTGATAACG GATACGCAGG GCGTCATTGA GTATGTGAAC
AAGAAATTTA TCCAGCTGAC CGGGTTCAGC CTGGAAGAGG CGGTCGGGAA GAATCCCCGC
ATCCTGAAGT CGGAAGCGAC GCCACCAGAG GTGTTTGTAG ACCTCTGGAA GACCATTTTG
AGCGGTCGGG AGTGGCGGGG CGAGCTGCTG AACCGCCGAA AAAACGGCGA GGTTTACTGG
TCAATTACCT CGATCAGCCC ATTGCGTAAT GATAGCGGCG AGATTACCCA TTTTATTGCC
AACGTTGAAG ACATTAACGA GCGGAAAAAC GCCGAGGCCA CCATCGAACA CCTGGCCTAT
TTCGATCCCC TGACCGACCT GCCTAACCGC CGCATGCTGC AGGATCGTCT GGAGCTTGCC
CTGCGCCGCA GCCGGCGTCA TGGCAGTAAT GTTGCGCTTA TGTATCTGGA TCTGGATAGT
TTCAAACATG TCAACGACAG TATGGGGCAT CCGGCGGGTG ACCTGCTGCT GAAGGAAATG
GCGGGGCGTT TCAGCGGGGT GGTGCGCGAC GATGACGTGG TCTGCCGGCT GGGGGGAGAC
GAGTTCGCCC TGATCCTGCA TGATATCCAT CAGGATCAGG ATGTGGTGCC GATTGCCCAG
AAGCTGATCG AGGCCGTAGC GCAGCCGGTG CCGCTGGATG GCCGCGAAGT GGTGGTGACG
GCCAGTATCG GCATTGCCCT GTTTCCCCGC GACGGCGGGG ATGTCAAGAA TCTGGAAAAA
CATGCCGACA TCGCTCTGTA CCATGCCAAG GAAGAGGGTA AAAATACCTT CCGTTTCTAC
CTGGAGGAAC TGAACAGTAC CATCAGTACC CGGATTGCAC TGGAACAGGG CTTGCGCTAT
GCCAAGGAAC GGCAGGAGCT GGAACTGCAC TACCAGCCCA AGGTCTGTGT GGCGAGTGGC
AAGGTGAGCG GGGTGGAGGC GCTGTTGCGG TGGCATAGCC CGGATTTCGG CCTGGTGTCG
CCTATCCGCT TTATACCGTT GGCTGAACAG ACCCGGCTGA TTATTCCGAT CGGCGAATGG
GTGCTGCGCA CCGCCTGTCT GCAGCAGGTG CAGTGGCGTG AACAGGGGTT GTTGCTCAAC
ATGGCGGTCA ACCTGTCTGC TATTCAGCTC AAATCCCCCG GTCTGGTTGA GCGGGTCGCG
GCCATTATCG ATGAAACCGG TATACAGCCG GAACATCTGG AACTTGAGCT GACCGAGAGC
GCCCTGGTCA ACAATCCCGA TGAGGTCGTG CAACTGCTGG AGCGGTTGCG TACCCTGGGG
TGCAGCATCT CCATCGACGA CTTCGGCACC GGCTATTCCT CGCTCAGCTA CCTCAAGTCC
TTCCCGGTAA CCATCCTCAA GATTGATCGT TCCTTTGTGC GCGATCTGGC CCATAACTCG
GGCGATCGGG CCATTGCCCG GTCGGTGGTA GATCTGGCGA ATAACCTTGA CATGAAGACC
GTGGCGGAAG GGGTTGAATC AGAGGAACAG CTGACGATCC TGCAGCAGAT CGGCTGTACC
TATATTCAAG GCTTTATCTA CTCCCGGCCG GTACAGGCTG ATCAGGTTTC AGCAGTGGTG
CGGAGATTAG GCGGGGCAGC GTAG
 
Protein sequence
MYIGKINKFR LQWGILLFGL LLLAGAVIHN LYRNYEDILE AEQQRLLTQS RVIAVNVANR 
LESTDRILRL IRRELGAYSE KEWSSQIPHQ RFELMVDALS GVHSMLVLDA RGKVVISNHR
EALGSNLGGR PYFQAALRDP NPEKLYVTPP FKTLPGTWGI ALVRVILNSQ GQFSGVVVAT
LNPEYFKVLL GSVQYAPDMR SCLAHGDGLQ FIMEPDRLGQ QGMNLAKPGS FFTRHMQSGK
KENVLSGTVY STGEQRLMAL STVQLAVLGM DRPLVIAVSR DLKQLHAGWH KHAVNQAITF
SIIVALSISA LIGFQGYQRE QLAKARAVEQ ALLDARQQLN DIIDFFPDAV FVIDRNKRVT
IWNRAIEKMS GVPKEEMLGK GDHEYSIPFY GQRRTQLLDL LDLDDAELAA KYSNIRRVGE
VLDAETFCPA LHDGKGAYVW ATGVPLYNAA GERIGAIEAI RDISDRKQSE LFLKKLTHGI
ENSASAVVIT DTQGVIEYVN KKFIQLTGFS LEEAVGKNPR ILKSEATPPE VFVDLWKTIL
SGREWRGELL NRRKNGEVYW SITSISPLRN DSGEITHFIA NVEDINERKN AEATIEHLAY
FDPLTDLPNR RMLQDRLELA LRRSRRHGSN VALMYLDLDS FKHVNDSMGH PAGDLLLKEM
AGRFSGVVRD DDVVCRLGGD EFALILHDIH QDQDVVPIAQ KLIEAVAQPV PLDGREVVVT
ASIGIALFPR DGGDVKNLEK HADIALYHAK EEGKNTFRFY LEELNSTIST RIALEQGLRY
AKERQELELH YQPKVCVASG KVSGVEALLR WHSPDFGLVS PIRFIPLAEQ TRLIIPIGEW
VLRTACLQQV QWREQGLLLN MAVNLSAIQL KSPGLVERVA AIIDETGIQP EHLELELTES
ALVNNPDEVV QLLERLRTLG CSISIDDFGT GYSSLSYLKS FPVTILKIDR SFVRDLAHNS
GDRAIARSVV DLANNLDMKT VAEGVESEEQ LTILQQIGCT YIQGFIYSRP VQADQVSAVV
RRLGGAA