Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1061 |
Symbol | |
ID | 6368599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1100057 |
End bp | 1101682 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642676456 |
Product | cytochrome c family protein |
Protein accession | YP_001951304 |
Protein GI | 189424127 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.409799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGAAAC AGAGACTGGC AGTTGCAGCA AGTATTGTCG GGCTTGGAGC CCTGTTGGCG ATTCCTTCGC TGGCAGCACC CAAGGCCAAA CCGGCAGCAA AACCTGCCAA CGACGGACGT GAGCAGTGCT ACATGTGTCA CACGGAGGTA AAGGCGCTCA AGGAGGCATC CAAACATGCC GCACTGGCCT GTTCGGTCTG CCATGACAAG ACCAAAGAGC ACCTTGCCAA TCCCGGCCCG GATACCAAAC CGGTAACCAA GCTGGACCCG GCGGTTTGTG GCTCCTGTCA CAAGAATCAG TATCAGAGCT TCTTTACCCC GCACTACCCC GAGGGCGGGT CCCGTAAGGA AAAGGGCGTG CCCACCGGCC GTTCACCAAT GCAGGATAAG CTGCTGGCCG GTCACGGCTT TACCTTTGAA CATGCCGAGC CCCGCGGCCA TGCCTTTATG GTGGTGGACC AGTTTGCAGT AGATCGTTTC CAGGGTGGAC GCTACCAGTT TAAGGGTGGC TGGAAGAACT ACGACAAGGT TGGCAAGACC TGGGATGTGC TGGAAGACAA AGGTGCCAGC GCCAAACTGA CCGAGACTGC CATGGCTGGT AACCCGACCT GTATCCAGTG CAAGACCTCC GACCTGATCC TGAAGTGGAA GTATCTTGGG GAAAAGGGCG GCAAGTTTGA CCGTACCTCC AACGTGAATG ATGTCATGAA GGATGTCCAT AATCCGGTCG GCTGTATTGA GTGCCACGAC CCCCACGGCA CTCAGCCCCG CGTGATCCGT GATGCCCTGA TTGCAGCCAT TGACAAGGAC CCGGCCAAGA ATATCTTTGC CAAAAACGGC AAGACCGACC TGAAGGTGGT TTCCTTCCGT GACGGCTTCC GCAAGATCGG CGTGATGGAG AAGACCGATT CCCGCATGAT GTGTGCCCAG TGCCATGTTG AGTACAATTG TAACCCCGGT ACCCAGTGGA GCGACGGCAA GCCGGTGACC TTTGCCTCGG ACCGTACCAA CCACTTCCCG CTCAAGAATG CCAAAGAGAT CCTGGCCCAC TACAAGCAGC TTGATTTCTT TGACTTCAAG CATGCCGTAA CCGGTGCCCG CCTGATCAAG CTGCAGCACC CCGAGGCAGA GACCTATGCC GGCTCCGTGC ATGACAAGGC CGGTGTGCAG TGCCATCAAT GCCATATGCC CAAGCTGAAG GGCAAAGACG GCAAGCCGTA CTCGACCCAC GGTGTGGTCA AGCCGATCAA TATGGCCAAA GAGTCCTGCA TCAGCTGCCA TAAGGATTCC AGTGTCGAGA AGGCCAAGTG GCAGATCGAC ACCATCCGTA ACTACACCAA GGGCAAGATG CGCAAGGCCG AATACTGGCT GGGCCAGCTG ATTGACACCT ATCTGGTGGC TTCCCGTGCC GGTGTCGCCC CTGCCGTACT GGATCAGGCC CGGGCCAAGC ATGAAGAGGC CCATGTGCTG TGGGAATACT GGACCGCTGA GAACTCAGAC GGTTTCCATA ACCCTGCTCT GGCCCGTGAA ACCCTGACCG GCTCCATTGC TGCCTCCAAG GCCGGGGTCA AGATCCTGAA TGATGCCATG GCAGTGGCAA ACAAGAAGGA AGAACCGAAA AAGTAG
|
Protein sequence | MLKQRLAVAA SIVGLGALLA IPSLAAPKAK PAAKPANDGR EQCYMCHTEV KALKEASKHA ALACSVCHDK TKEHLANPGP DTKPVTKLDP AVCGSCHKNQ YQSFFTPHYP EGGSRKEKGV PTGRSPMQDK LLAGHGFTFE HAEPRGHAFM VVDQFAVDRF QGGRYQFKGG WKNYDKVGKT WDVLEDKGAS AKLTETAMAG NPTCIQCKTS DLILKWKYLG EKGGKFDRTS NVNDVMKDVH NPVGCIECHD PHGTQPRVIR DALIAAIDKD PAKNIFAKNG KTDLKVVSFR DGFRKIGVME KTDSRMMCAQ CHVEYNCNPG TQWSDGKPVT FASDRTNHFP LKNAKEILAH YKQLDFFDFK HAVTGARLIK LQHPEAETYA GSVHDKAGVQ CHQCHMPKLK GKDGKPYSTH GVVKPINMAK ESCISCHKDS SVEKAKWQID TIRNYTKGKM RKAEYWLGQL IDTYLVASRA GVAPAVLDQA RAKHEEAHVL WEYWTAENSD GFHNPALARE TLTGSIAASK AGVKILNDAM AVANKKEEPK K
|
| |