Gene Glov_1029 details

Gene Information

• Locus tag: Glov_1029
• Symbol: prfA
• ID: 6368973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 1069504
• End bp: 1070571
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 642676424
• Product: peptide chain release factor 1
• Protein accession: YP_001951272
• Protein GI: 189424095
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0336853
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGACA AGATCCAGGA TTTAGAGATC CGTTTTCAGG AGCTGGAGTC ATTGCTATCC 
GATCCGACGG TGATTGCCAA CCAGCCGGAG TTCCGCAAGC TTTCCCGTGA ACATGCCGAT 
CTGGCACCGC TGATCGAGGC GTTCCGCCGC TACAAGAAGG TGCTGGATGA ACTGGAAGAG 
AATCAGGAGC TGCTGGCTGA TCCCGAGATG AAGGAGATGG CGGAAGAGGA GATCAGCCGC 
CTCAGTCAGG AAAAAGAGCG CCTTGATGCC GAGATCAAGA TCCTGCTGCT GCCCAAGGAT 
CCCAATGATT CCCGGGACGT CATTCTGGAA ATCCGGGCCG GAACCGGTGG CGATGAGTCA 
GCCCTCTTCA GTGGTGACCT TTTCCGGATG TACTCCCGCT TTGCCGAGAA AAACCGCTGG 
AAGGTGGAGA TGCTCTCCTG CTCCGAGTCG GAGCGGGGAG GCTACAAAGA GGTGATCGCC 
TCCATTGAGG GGCAGGATGT CTATGCCAAG CTCAAGTACG AATCCGGCAC CCACCGGGTC 
CAGCGGGTGC CTGAGACCGA GGCCCAGGGG CGGATTCATA CCTCTGCCTG CACCGTGGCG 
ATCATGGCCG AGGCCGAGGA TGTGGATATC GACATCAACC CGGCTGACCT CAAGATCGAC 
GTCTACCGTT CTTCCGGTGC CGGTGGCCAG CATGTCAACA CCACAGACTC GGCTGTACGG 
ATTACCCATA TTCCCACCGG TACGGTGGTG GCCTGCCAGG AGGAACGTAG CCAGATCAAG 
AACCGGGCCA AGGCGATGAA GGTTCTGAAG ACCCGCATTC TTGACACTAT TCAGCAGGAA 
CAGAATGCCA AGCTGGCAGC CGATCGTAAG CAACAGGTGG GCAGCGGTGA CCGCTCCGAG 
CGGATCCGGA CCTACAACTT TCCCCAGGGC CGGATGACCG ACCACCGGAT CGGCCTGACT 
CTTTATCGGC TGGATTCAAT CATGGCAGGC GACATTGAAG AAATCACCGA TGCCCTGCGC 
GCACACTACC AGATGGAAGC GCTCAAGGCC CAAAGTGAAG GCGCCTGA 

 

Protein sequence

MFDKIQDLEI RFQELESLLS DPTVIANQPE FRKLSREHAD LAPLIEAFRR YKKVLDELEE 
NQELLADPEM KEMAEEEISR LSQEKERLDA EIKILLLPKD PNDSRDVILE IRAGTGGDES 
ALFSGDLFRM YSRFAEKNRW KVEMLSCSES ERGGYKEVIA SIEGQDVYAK LKYESGTHRV 
QRVPETEAQG RIHTSACTVA IMAEAEDVDI DINPADLKID VYRSSGAGGQ HVNTTDSAVR 
ITHIPTGTVV ACQEERSQIK NRAKAMKVLK TRILDTIQQE QNAKLAADRK QQVGSGDRSE 
RIRTYNFPQG RMTDHRIGLT LYRLDSIMAG DIEEITDALR AHYQMEALKA QSEGA