| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0978 |
|---|
| Symbol | |
|---|
| ID | 6366824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1017044 |
|---|
| End bp | 1017634 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642676373 |
|---|
| Product | phosphoheptose isomerase |
|---|
| Protein accession | YP_001951221 |
|---|
| Protein GI | 189424044 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0530392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAT TTATCGCCAA GCAACTTCAG GACCACCTGG CCCTGTTTCA GAAGATGGAA
GCCGAACTGA CCGCACCGGT GGCAGAACTT GCGGAGCGCC TGATTGAGAC CTTCAAGATC
GGCAACAAAC TCCTGATCAT GGGTAACGGC GGTTCGGCAG CCGACGCCCA GCATTTTGCC
GGAGAGATTG TCAGTCGTTT CAGGATTGAA CGGCCCGGTC TGCCGGCTAT AGCCCTTTCA
ACCGATACCT CCATCATAAC CGCCATCGGC AACGATTACG GCTTTGAGCG GATCTTTTCC
CGCCAGGTCG AGGCGCTGGC GGTCCCGGGC GACGCGGTCA TCGGCATCTC CACCAGCGGC
AACTCTCCAA ATGTCCAGAA GGCGCTGGAG GTGGCCCGCC AGGCCGGCTG CACCACCATC
GGCCTGCTGG GCAAAGACGG CGGCAGCATC AAGGCGGTCT GCGACATCCC GCTGATCATC
CCCTCCAATG ACACCCCCCG GGTACAGGAA GGTCACATCG CCGTAATCCA CATCCTCTGC
GACCTGATCG AGCAGGGCCT GTTCGGCATA TTTGCCGGGG AAGGACGTTA G
|
|---|
| Protein sequence | MQSFIAKQLQ DHLALFQKME AELTAPVAEL AERLIETFKI GNKLLIMGNG GSAADAQHFA
GEIVSRFRIE RPGLPAIALS TDTSIITAIG NDYGFERIFS RQVEALAVPG DAVIGISTSG
NSPNVQKALE VARQAGCTTI GLLGKDGGSI KAVCDIPLII PSNDTPRVQE GHIAVIHILC
DLIEQGLFGI FAGEGR
|
|---|
| |