| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0877 |
|---|
| Symbol | |
|---|
| ID | 6369169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 902087 |
|---|
| End bp | 903079 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642676273 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_001951121 |
|---|
| Protein GI | 189423944 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACA AAATTCTGGT AACCGGCGGG TGTGGCTATA TTGGCAGTCA TGTGGTACGG
CAGCTTTCCG AGGCAGGCCA TTCGGTGGTG GTCTACGACA ACCTTTCCAC CGGCTTTCAA
GATGCCCTGC TGCACGGCGA AGAACTGATC CAGGCGGAGC TGGCTGATCA TGCTGCTCTG
GAAGCGGCCT TTCAAAAGCA CCGCTTCAAG ACGGTGCTGC ATTTTGCCGC CGCCATTGTG
GCGCCTGAGT CGGTCTCGCT GCCGCTTAAG TATTACGGTA ACAACACCCG CAATACCCTC
GGCCTGCTGG AGGCCAGCGT GCGAAACGGC GTTGAGCGCT TTGTCTTCTC CAGTACCGCT
GCGGTCTATG GTTTTCCTGA AGGGGGCAGC GCCTCGGAGG AAACTCTGCT GGCGCCGATC
AACCCCTATG GTACCTCCAA ACTGATGAGT GAATGGATGC TGCGTGACAC GGCCGCTGCC
CACGGCCTCA AGTATGTTGC CCTGCGCTAC TTCAATGTGG CCGGAGCTGA CCCACAGGCA
CGGATCGGCC AGCGCACCCC GGAGGCGACC CACCTGATCA AGATCGCCTG CCAGACCGCA
CTGGGCCAGC GTCAGCAGGC AGCCATCTAC GGCACAGACT ATCCCACACC GGACGGCACC
GGCATCCGTG ACTATATCCA TATTGAAGAC CTGGCAGCAG CCCACCTGGC TGCCCTTGAC
TATCTGGACA AGGGGGGTGA GTCCACAGCC ATCAATGTGG GCTATGGCCA GGGCAGCAGC
GTGCGTGAGG TACTGGCCAT GGTCAAACAG GTCAGCGGCG TTGACTTCAG GGTGGTTGAA
GAGGGGCGCC GCCCCGGCGA TCCAGCCTGT CTGGTCGCCC GGGCAGAGAA GATCAAGCTG
CTGACCGATT GGCAGCCACG CTTTAACAGT TTGGAAACCA TTGTAGAGGA TGCCTGGCGC
TGGGAATCGT CCTTGGCCGC ATGCACGCGC TAA
|
|---|
| Protein sequence | MSDKILVTGG CGYIGSHVVR QLSEAGHSVV VYDNLSTGFQ DALLHGEELI QAELADHAAL
EAAFQKHRFK TVLHFAAAIV APESVSLPLK YYGNNTRNTL GLLEASVRNG VERFVFSSTA
AVYGFPEGGS ASEETLLAPI NPYGTSKLMS EWMLRDTAAA HGLKYVALRY FNVAGADPQA
RIGQRTPEAT HLIKIACQTA LGQRQQAAIY GTDYPTPDGT GIRDYIHIED LAAAHLAALD
YLDKGGESTA INVGYGQGSS VREVLAMVKQ VSGVDFRVVE EGRRPGDPAC LVARAEKIKL
LTDWQPRFNS LETIVEDAWR WESSLAACTR
|
|---|
| |