| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0786 |
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| Symbol | |
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| ID | 6367201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 806719 |
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| End bp | 808515 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642676183 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_001951032 |
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| Protein GI | 189423855 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA AGGTTTCAGA TTACATTGCG TCATTTATGG TTGAAAACGG CATCACCGAC
CTGTTTACCG TGACGGGTGG TGGTGCAATG CACCTTAATG ATTCATTGGG TAACCATCCT
GAGCTGGTTT CAACCTATAA CCATCATGAG CAGGCATGTG CAATTGCGGC AGAAGCGTAT
GCCCGGCTAA CCGGCAGGAT TGCTTTGGTC TGTGTGACCA GTGGTCCTGG TGGCACCAAT
GCGATTACTG GTGTTATGGG AGGGTGGGTC GATTCAATCC CGATGTTTGT AATTTCGGGG
CAAGTTAAGT TTTCAACAAC TATTGCTTCT ACCAACGTGC CGCTTCGACA GTTAGGGGAC
CAAGAGTTTA ATATCGTCGA TTCCGTGCGG TGTATGACCA AGTATGCAGT GATGTTGACG
GAGCCTGAGT CCATTGCCTA CCACCTTGAG CGAGCTCTCT TCCTTGCCGG ACATGGCAGG
CCAGGCCCTG TGTGGCTTGA CATCCCGCTG AATGTACAGG GGGCTCTCAT TGAAACAGAT
GCGCTCCAGC ATTACGACCC GTCTGAAGAT GCTGTTCAGG TGGTTGCGCC ACCTTCCAAT
GATGTGTATT CCCAGCTTAT TGAAAAAATT TGTAATGCCC GAAAACCTGT AATACTCGCC
GGTAGCGGTA TTCGTCTTTC CGGTAGTCAT GATGTCTTTA TACAGCTACT TGAAAAACTT
AACATCCCTG TTGTCACAGC GTGGAATGCC CATGACAATC TATGGGACGA TCACCCCTTG
TATTGTGGGC GTCCAGGCAC TATCGGCACA CGAGGCGGTA ATTTTGTTGT CCAAAACTGT
GACCTGCTGC TATCGCTTGG TTGCCGGATG AATATTCGCC AGATAAGTTA TAATTGGGAA
AATTTTGCGA AAGATGCGTA TCTCGTCGCC GTAGATATTG ATGCGGGAGA ATTGAAAAAG
CCAACATTAA CAGTAGATAT GCCGATTCAT GCGGATTTGG GTGATTTTTT GCCGGGGCTG
CTTGGGGCGA TGCAAGCCGA TCATAAGCTT GGAAATATCG AATGGTTGGA GTGGTGTCGG
AAGATAAACC AGAAGTATCC TGCGGTACAG CCCCATCACT ACACCCCCCA CTCTCCAGTC
AACCCGTATG TTTTCATGGA CAGGCTCTCA CAGTATCTTG ATGAGGGAGA TGTGACCGTG
ACAGGAAACG GCAGTGCCTG TGTGTGCTCA TTCCAGGCCA TGGTTATCAA AAAAAATCAG
CGGCTCTTCA CAAACTCAGG GTGTGCCAGC ATGGGCTACG GTCTTCCCGC TGCGCTTGGT
GCTGCTGTCG CTCTTGGCGG CAAACGGGTA ATCTGCCTTG ACGGTGATGG TAGTATTCAG
ATGAATTTGC AGGAGTTACA GACTATTATT CACAATAAAC TCAACTTGAA AATATTCTGG
TTAAATAACG ACGGGTACCA CTCCATTCGT CAAACCCAAA CCAATATTTT TAATGCGAGG
TTTTGCGGCG TAAATGAAAC CAGCGGTATA AGTTTTCCCA GTGCGGATAA AATTGCACGA
GCATATGGTT TTGAATTTAT TAAAATTGAT GCCGTTGAAG ACATGGATGA AAAAATAAAG
AAAGTCTTGC TATCGGATAC CTCTATTGTG TGCGAAGTGA TTCTAAATCC TGCTCAGGGG
TTTGAGCCCA AGTTGTCTTC ACGCATACTT CAGGACGGTA CAATGGTTTC GCCATCGCTT
GAAGACATGT TTCCATTTTT GAGCGCTGAA GAAATGAAAA TGAATGCTTA CAAATAA
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| Protein sequence | MEMKVSDYIA SFMVENGITD LFTVTGGGAM HLNDSLGNHP ELVSTYNHHE QACAIAAEAY
ARLTGRIALV CVTSGPGGTN AITGVMGGWV DSIPMFVISG QVKFSTTIAS TNVPLRQLGD
QEFNIVDSVR CMTKYAVMLT EPESIAYHLE RALFLAGHGR PGPVWLDIPL NVQGALIETD
ALQHYDPSED AVQVVAPPSN DVYSQLIEKI CNARKPVILA GSGIRLSGSH DVFIQLLEKL
NIPVVTAWNA HDNLWDDHPL YCGRPGTIGT RGGNFVVQNC DLLLSLGCRM NIRQISYNWE
NFAKDAYLVA VDIDAGELKK PTLTVDMPIH ADLGDFLPGL LGAMQADHKL GNIEWLEWCR
KINQKYPAVQ PHHYTPHSPV NPYVFMDRLS QYLDEGDVTV TGNGSACVCS FQAMVIKKNQ
RLFTNSGCAS MGYGLPAALG AAVALGGKRV ICLDGDGSIQ MNLQELQTII HNKLNLKIFW
LNNDGYHSIR QTQTNIFNAR FCGVNETSGI SFPSADKIAR AYGFEFIKID AVEDMDEKIK
KVLLSDTSIV CEVILNPAQG FEPKLSSRIL QDGTMVSPSL EDMFPFLSAE EMKMNAYK
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