| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0748 |
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| Symbol | |
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| ID | 6368155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 758197 |
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| End bp | 760020 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642676140 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001950994 |
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| Protein GI | 189423817 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGGG ACAACATAAT TTCAGGCCGG ATTCTGGATG ACATGACCGA CGGGGTACTT
GCCGTTGACC TCTCCGGCAC TATCATCACC TTTAACCCGG CAGCAGCCAG AATTCTGGGG
ATTGCAGAAG AAAACGCGCT GATGAAATCC TTTGGCGAGA TATTTCTGCT GGCTGAAGAG
AACGACGATT TCAACCAGAC CATTCTGGAT GCGATCTACG AATCATCCAC CAGTCACAAC
CGGATTGTCC CGTTTTCCTG CAATGACAAA CGCACCACCC TGGCGTTAAC CACCACCTTT
CTTAAAGCAG AAGATGGCAC CGACCAGCGG ATGGGGGTGA TTGCCGTATT CAGTGATATT
ACTGAACTGC AGGCATTACA GGAGGCCGAA GCGCGACTGG CGGAAGAGCT GAAGAGCAAA
CACAAAGAGC TGCAGGCAGC CTACCTGAAG ACTGAAGAAG GGAATCAGCA GTTACAGTCG
GCCCTGAAAA AGGTTCAGAT CATCAGGAAC ACCGCCACCG CCTTCACCAT CATTCTCTTC
CTGGGGATCG GGCTGTTTGT CTGGAACCGC AAGCCCGCCA GTATCAGCTC GTCACCGGCA
TCAGCAGCAA CAGTCCAGGG AGCAGCAACA ACCGTCATAC CTGTTACGCC GCAGCCGGTT
TCAAGCAGCA TCGCCCTGAC CGGCAAGCTG CTGCCGTTGC AGATGGTGAA TATCACCAGC
CCGATCTCCG GCAAGGTGGG GCAGGTGATG GTCCGCTACG GAGATGTTGT CAAGGCTGGA
CAACCGCTGC TGACCATGGA CACCTCTGAG GCGATGATCA AGTACCGCGA GGCAAAGGCA
GCCTACATCA AGGCGCAAAA CAGTTACCAA CAGATGGAGA AATGGGATGC CAGCGCAGAT
GTTGCCAGGG CACACCGCTC CCTGGCAAAG GCCAAACTTT CACTGGAAAA CCAAAAGAAA
ACCCTGGACG AATCAGAGCG GCTGTATAAA AAGGGGATTA TCCCGGCCAC CGAGTATGAA
TCTGCCAAAC ACCAGTACAG CAACCAGCAG ATGGACTACC AGAGCGCCCA GGAAGAGTTG
AAGGCTGCCC AGGAAAAGGG GAACAGCGAA AACCGTAAAG TTTCCCGTTT TGAGCTGGAA
AATGCCGAAT CCCGTATGCG GCAGGCAGAA AAGGATATTG CCTCCTCCAC AGTGGTGGCC
CCGGTTTCCG GTATTATCAT GAAACCGCCC GCCAGTGGCC AGTCCAAGGA AGGCAGAACC
GTGGAGCGCG GCACCACCTT CCAGCAGGGC GAGCTGCTGC TGGCCATCGG CGACCTGTCA
GGATTTTCCG TCAATGCCAG GCTGGATGAG GTGGATGTCA CCAAGGTCCA GCTGGGACAA
AAGGTACGGG TAAGCGGCGA TGCCTTTCCC GGTCAACAGT TGACCGGCAG CATCCAGAGC
ATCTCCCCCC ATGCTGAAGA AGGTGAAGCA GGCAAGTCAG TTTCCTCCTT TGGCATCAAG
GTGGTAATTG ACTCAGTACC GCCAGAACTG AAAAAACGGA TCATGGTGGG GATGACCGCC
AACCTTGAGA TTATCATCTA TGAAAAGCCT GATGCCCTGA TGGTGCCGCT GGCTGCTGTG
CATGATGAGC AGGGCAAGCG TTATGTCACC AGAAAAAAAG GGACTGCCCC GTCAGATGCG
GCTGAAAAAG TACCGGTCAC CACCGGCTAC ACCACCCAGG ATACGGTTGA GATCACCAGC
GGGCTGAAGG CCGGTGACCT GCTGGAGGTA ACCACGTTCG GCCCTCCGCC TGCACCCGCC
AGCCCCTCTG GCGGGAAGCC CTGA
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| Protein sequence | MERDNIISGR ILDDMTDGVL AVDLSGTIIT FNPAAARILG IAEENALMKS FGEIFLLAEE
NDDFNQTILD AIYESSTSHN RIVPFSCNDK RTTLALTTTF LKAEDGTDQR MGVIAVFSDI
TELQALQEAE ARLAEELKSK HKELQAAYLK TEEGNQQLQS ALKKVQIIRN TATAFTIILF
LGIGLFVWNR KPASISSSPA SAATVQGAAT TVIPVTPQPV SSSIALTGKL LPLQMVNITS
PISGKVGQVM VRYGDVVKAG QPLLTMDTSE AMIKYREAKA AYIKAQNSYQ QMEKWDASAD
VARAHRSLAK AKLSLENQKK TLDESERLYK KGIIPATEYE SAKHQYSNQQ MDYQSAQEEL
KAAQEKGNSE NRKVSRFELE NAESRMRQAE KDIASSTVVA PVSGIIMKPP ASGQSKEGRT
VERGTTFQQG ELLLAIGDLS GFSVNARLDE VDVTKVQLGQ KVRVSGDAFP GQQLTGSIQS
ISPHAEEGEA GKSVSSFGIK VVIDSVPPEL KKRIMVGMTA NLEIIIYEKP DALMVPLAAV
HDEQGKRYVT RKKGTAPSDA AEKVPVTTGY TTQDTVEITS GLKAGDLLEV TTFGPPPAPA
SPSGGKP
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