| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0739 |
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| Symbol | |
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| ID | 6367174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 750404 |
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| End bp | 751951 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642676131 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001950985 |
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| Protein GI | 189423808 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC CGATGCGGGT CACCTCATTG CTTATCTATC TGGCCGTGCT GTTCCTATGT
ACCGCAGCAG GCGGCTGCAA CAGCAACCAG CTGCCCACCT CCGGCTCCCG CAGCATGCTG
GCAACCGCCA ACGACCTGCA GGACAAGCGG ATTGCCGTGC TGCAGGGTTC CACCCACGAA
ATGTACGCGA CAAGGCACTA TCCCGGGGCC ACGGTGCTGC AGTACAAATC CGTCTCCGAC
ATGCTGCTGG CATTAAAGAG CGGCAAGGCA GACGCCGCCA TCTACAGCCG CGATGAGCTG
ATGGAATATA TGCGGGACAA CGATGAATTC GGATTTGTGG GAGGGCCCCT GTACCGCACG
CCGATCTCCA TTGCCTTTCA TCAACAGGAT GCCGGGCTGC TCCTCTCTTT CAACCGTTTC
CTGCAGCAGA TCCGCACGGA CGGCACCTAT GACGGCATGC TCAAACGCTG GATGCAGCAG
GGCGCTGTCG GGATGCCGAA GCTGACCGCC GCCGGAACCG GCAAACCTCT GGTGGTGGGG
ATTCTAAGCG ACAACGGGCT GCCCTTTATC GTTATGAAAG AGAACCGGTT GATCGGTTTT
AATATCGAGC TGATGGAGCG TTTCGGTGCC TTCTGCAACC GCAGCATCAA ATACGCGGAC
ATAGAGTTCG GCAGTCAGAT TGCCGCCCTG GCAGGCCATA AGATCGATAT GATCGCCACG
CCCCTGGCCA TCACGGAAGA ACGCAAGAAA CGGGTCGCCT TTTCCGCTCC TTATTACACG
GTCGATTCAC TGGCCTTTGC CCTGAAGAAG AACATCGCAA CCAACAAAAG TTTAACACCA
TCCGCCCCCT CCTTCCTCAG CAAGCTTGTC ACCAGTTTTC AGAGCAACAT CATCCATGAG
AGGCGGTATC TGCTGATCCT GGACGGTCTC AAGACCACCG TGGTCATCTC GGTCTTCGCC
ACCCTCTTCG GCACCCTGCT GGGGGCGCTG ATCTGCTTCA TGCGGATGGC AAAGAGCAGG
CTGCTCTCTG CCCCTGCCAG GCTCTACATC GCCATCCTGC GGGGCACACC GGTACTGGTG
CTGTTGATGC TGATCTTCTA TGTCGTCTTT GCCTCGATCA ACATCAACCC GGTCATTGTG
GCGGTGATCG CCTTTGGCAT GAACTTCGGC GCCTACACCG CCGAGATCTT CAGGACCGGC
ATTGAAGGGG TGGAAAAGGG ACAGACCGAG GCTGGTATCT CTTTGGGCTT CACCAGGACC
AGCACCTTCC TGCATATTGT GCTGCCCCAG ATGGTGCGGC GGATCCTGCC GGTCTACAAA
GGCGAGTTCA TCTCCCTGGT CAAGATGACC TCCATTGTCG GCTACATCGC GGTACAGGAT
CTGACCAAGG CCAGCGACAT CATCAGAAGC CGCACCTTTG ACGCCTTCTT TCCCCTGGTC
ATGGTGGCCA TCCTCTACTT CCTGATCTCA TGGACACTGA TGCAATCCCT TGAGTACCTG
GAACGGATCA CTGATCCCAA ATACAAAAAG AGAAAGGCAG GCAGGTAA
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| Protein sequence | MNKPMRVTSL LIYLAVLFLC TAAGGCNSNQ LPTSGSRSML ATANDLQDKR IAVLQGSTHE
MYATRHYPGA TVLQYKSVSD MLLALKSGKA DAAIYSRDEL MEYMRDNDEF GFVGGPLYRT
PISIAFHQQD AGLLLSFNRF LQQIRTDGTY DGMLKRWMQQ GAVGMPKLTA AGTGKPLVVG
ILSDNGLPFI VMKENRLIGF NIELMERFGA FCNRSIKYAD IEFGSQIAAL AGHKIDMIAT
PLAITEERKK RVAFSAPYYT VDSLAFALKK NIATNKSLTP SAPSFLSKLV TSFQSNIIHE
RRYLLILDGL KTTVVISVFA TLFGTLLGAL ICFMRMAKSR LLSAPARLYI AILRGTPVLV
LLMLIFYVVF ASININPVIV AVIAFGMNFG AYTAEIFRTG IEGVEKGQTE AGISLGFTRT
STFLHIVLPQ MVRRILPVYK GEFISLVKMT SIVGYIAVQD LTKASDIIRS RTFDAFFPLV
MVAILYFLIS WTLMQSLEYL ERITDPKYKK RKAGR
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