Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0737 |
Symbol | |
ID | 6366872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 748822 |
End bp | 750048 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642676129 |
Product | putative sigma54 specific transcriptional regulator |
Protein accession | YP_001950983 |
Protein GI | 189423806 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGACA CTCCACTCAA CCAGCTGCTT GATCGCCTGA TCGCCGTGGC CGAAGACCTC TCCATGGGGC GTTACGGTAA ATACAACGAC ATTTTCGAAC TGACCAAAAG CGGCCAGTAC CCCCCCCTGA TCGCCCGCTT TGCCGAGTCG TTCGGGATGA TGGCGGTCAA GGTCGAGGCA CGGGAATACC GGCTGGAGCA GATCATCGAA GAGCTTCGGG CAACCGAACT CCAACTGCGC ACAGCCCGGG AACAGCTGGC CCGCGAGAAC AGCAGCCTCA AAAAGAACCT GCGCCGTTCC TTTCCCTTTT CCTCCATCCT CGGCACCAGC CCCCAGATCA GGGAGCTGAT CGGCAAGGCA GAACGGATAG CCGATTCCCG CCTGTCGGTG ATCATCACCG GCGAGACCGG CACCGGCAAG GAACTGTTCG CCAAGGCGAT CCACTTCAAC AGCCCCCGCA GCGCCAAGCC GTTTGTGGCA GTCAACTGTT CCGCCATCCC GGAGACCATC TTTGAAAGCG AAATGTTCGG CATTGAAAAG GGGGTGGCCA CCGGGGTCGA GGCCCGCATC GGCAAGATCC AGCAGGCGCA AGGCGGCACC CTGTTTCTGG ACGAGGTGGG GGAGATGCCG TTGCAACTGC AGGCCAAACT TTTGCGGGTG CTGGAAGAGC GGACCCTGGA ACGGGTCGGC AGCCGGACCG CCATCCCGGT TGATCTGAGG ATCATTGCCG CTACCAACCG CGATTTGACC AAAGAGATTG CCAAAGGCAG CTTCCGGGAG GATCTCTACT ACCGCCTGAA CGGCGTTACC CTGCGGATTC CGCCCCTGCG GGAACGTAAA GGCGACATTG ACCTGATTGC ACGCCAATTT CTGGAGAAGT GGGGCCGCAG TTGCGGCAGG CCGCCGATGC GGATTGCCAA AGAGGCGCTG GAACGGCTGC GCGGCTATAC CTGGCCCGGC AACGTGCGTG AACTGGATAA CGAAATTGAG CGGGCTGTGG CACTGGCCTA CGGCGACACC ATTACCATGA CCGACCTTTC TGATCCGCTG CAGCAGCAGA CCACTCTACC AGCAGCCGGG GGAAAATCAC TGCTGAAGGA TTCAGAGAAA CAGCTGATCG AGCAGGCGCT GAAAGAGGCC AAAGGCAACA AGACCCAGGC AGCAGAACGG CTGGGAATGA GCCGCGAGGG GCTGCGCAAG AAGCTGAAGC GGCTGGGCAT GGAGTAG
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Protein sequence | MHDTPLNQLL DRLIAVAEDL SMGRYGKYND IFELTKSGQY PPLIARFAES FGMMAVKVEA REYRLEQIIE ELRATELQLR TAREQLAREN SSLKKNLRRS FPFSSILGTS PQIRELIGKA ERIADSRLSV IITGETGTGK ELFAKAIHFN SPRSAKPFVA VNCSAIPETI FESEMFGIEK GVATGVEARI GKIQQAQGGT LFLDEVGEMP LQLQAKLLRV LEERTLERVG SRTAIPVDLR IIAATNRDLT KEIAKGSFRE DLYYRLNGVT LRIPPLRERK GDIDLIARQF LEKWGRSCGR PPMRIAKEAL ERLRGYTWPG NVRELDNEIE RAVALAYGDT ITMTDLSDPL QQQTTLPAAG GKSLLKDSEK QLIEQALKEA KGNKTQAAER LGMSREGLRK KLKRLGME
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