| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0703 |
|---|
| Symbol | |
|---|
| ID | 6369421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 715402 |
|---|
| End bp | 717513 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642676095 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
|---|
| Protein accession | YP_001950949 |
|---|
| Protein GI | 189423772 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT CTGATGGCCA CATAACCAGC GGGATGATCC TGATTGTTGA GGATAATATC
CCTTTTGGCG AGCTGGTTGC CGGTACCCTG CGGGAAGACG GGTATCAATG CCATACCGTA
TCCACCGGTG CCGCTGCCCT GATCTGGCTT GCAAGCCATC CGGTCAATCT GCTGTTACTG
GACTATACGC TGGTGGATAT GACCGGTGAG GCATTTATTG CCGCCATGGC TGAGCAGGGC
AGTCAGGTCC CTTTCGTGGT GGTGACCGGG CGGGACGATT CCAATCTGGC CGTGCAGATG
ATCAAACAGG GGGCCAGCGA TTTTGTAGTC AAGGATACGG CCCTGCTGGA CCGGCTGCCG
GTAGTGGTGT CGCGTACCCT GCAGGAGGCT GCGACCATGC AGCGTCTGTG CCATGCAGAA
CAGGCACTGC GCCAGAGCGA GTTACGGCTC GCCCGTGCCC AGCGGATCGC CCGGATCGGC
AGCTGGGAGT GGGATCTGCA GAGTAACGGC CTCTATTTTT CACCTGAACT GTTTTCGATT
TTGGGCTACG ACGGGACTGC CCCCCCTGAT GTGTCACTGG AGTGGTTCTA CCGCCAGATT
AATCCGTCCG ATACCTGCTT TGTCAGAAAG GCGCTGAGTG CTGCCATAGA GTCCGGCCGC
AATCTGAACC AGACCTTCAG GATCGTAACC TGCTCCGGGG AAGAGATTGT GGTGGCCAGC
CAGGCCGAAC TGGAGTATGA CAGCGACGGT CGGCCGGAGC TGCTGGTGGG CACCCTGCTG
GATGTTACGG ACAGGACCAG GGCCGAGCAG GAGATTCACC ACCTTGCCAA TTACGATACC
CTGACCGGCC TGCCCAACCG CAACCTGCTG CATGACCGGT TGCAACAGGC GATTGTGCAG
GCAGCACGTG TACAGGGCAG TGTCGGGGTA CTCTTTCTGG ATCTGGACCG TTTCAAAGGG
GTGAACGAGC TGCTGGGGCA TCGTGCCGGT GATCAGCTGT TGCGCACAGT CGCCGAGCGT
TTGCGGGTCT GCGTCCGGGA GAGCGATACC CTGGCCAGGG CCGGAGGGGA CGAGTTTGTC
ATCATCCTGA GTGTCGTCTC CGATGAAGAT GGCATCAGCA GCGCAGCAAG CAAGATCCTT
GCGATTATCT CGGAACCGTT CGTGATTGAA GAGCGGGAGC TGTATCTGAC TGCCAGCATC
GGGGTGGCGG TCTATCCCAC CGATGGTGCC GATGTGCAGT CATTGCTCAA GCATGCCGAT
CTGGCCATGT ACCAGGCCAA GGATATGGAT CGCAACAACT TCCAGTTTTT CTCCAGTGAT
CTGAACGTCA AGGTGATGGA GCGGATGGTG CTGGAGAGCT CATTGCGGCG TGCCCTTGAA
CGGGATGAGT TCCAGCTGCT CTACCAGCCC CAGGTGGATG TCATCACCGG CAGTGTGGTC
GGGTTTGAGG CGTTGCTGCG TTGGCATCAT CCCGACCTGG GTACCATCTC GCCGGAAAAA
TTCATTCCGC TGGCTGAAGA GACCGGCCTG ATCCTCTCCA TCGGTGAATG GGTGTTGCGT
ACCGCCTGCC GTCAGGCCAA GATCTGGCAG GATGCCGGGT TAAGACCGGT CCGGATGGCA
GTCAACCTCT CCGGCCGTCA GTTCAGAATG AAGCTGGACG AGATCGTGGC GGCCATCCTG
CTTGAAACCG GTTTTGATCC CCGCTGGCTT GAACTGGAGC TGACCGAGAG TATCCTGATG
CGTAATGCCT CGGATAACAT TGAACTGCTA CAGGCTCTGA CTGCCATGGG GTGCAGCCTC
TCCATTGACG ACTTCGGCAC CGGCTACTCA TCGCTGGCCT ATCTCAAACA TTTTCCGCTG
GAGCGGCTCA AGATTGATCG TTCCTTTGTG CGGGATGTCA CCACCAACCC TGATGACCGG
GCGATCGCCA AGATCATCAT CGACATGGCC CATACCCTCA AGATGGAGGT TACCGCTGAA
GGGGTTGAGG AACGTGAACA GCTGGAGTTG CTGAAGCGCT ACGGCTGCCG TGAGATGCAA
GGGTTTTTCT TCAGCAGGCC GGTCCCTGCT GCAAGTGCTG AAAAGCTTCT TCGCAAAGGA
ATCACATTCT GA
|
|---|
| Protein sequence | MADSDGHITS GMILIVEDNI PFGELVAGTL REDGYQCHTV STGAAALIWL ASHPVNLLLL
DYTLVDMTGE AFIAAMAEQG SQVPFVVVTG RDDSNLAVQM IKQGASDFVV KDTALLDRLP
VVVSRTLQEA ATMQRLCHAE QALRQSELRL ARAQRIARIG SWEWDLQSNG LYFSPELFSI
LGYDGTAPPD VSLEWFYRQI NPSDTCFVRK ALSAAIESGR NLNQTFRIVT CSGEEIVVAS
QAELEYDSDG RPELLVGTLL DVTDRTRAEQ EIHHLANYDT LTGLPNRNLL HDRLQQAIVQ
AARVQGSVGV LFLDLDRFKG VNELLGHRAG DQLLRTVAER LRVCVRESDT LARAGGDEFV
IILSVVSDED GISSAASKIL AIISEPFVIE ERELYLTASI GVAVYPTDGA DVQSLLKHAD
LAMYQAKDMD RNNFQFFSSD LNVKVMERMV LESSLRRALE RDEFQLLYQP QVDVITGSVV
GFEALLRWHH PDLGTISPEK FIPLAEETGL ILSIGEWVLR TACRQAKIWQ DAGLRPVRMA
VNLSGRQFRM KLDEIVAAIL LETGFDPRWL ELELTESILM RNASDNIELL QALTAMGCSL
SIDDFGTGYS SLAYLKHFPL ERLKIDRSFV RDVTTNPDDR AIAKIIIDMA HTLKMEVTAE
GVEEREQLEL LKRYGCREMQ GFFFSRPVPA ASAEKLLRKG ITF
|
|---|
| |