| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0613 |
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| Symbol | |
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| ID | 6368082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 609544 |
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| End bp | 612654 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642676004 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001950859 |
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| Protein GI | 189423682 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.147117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACCG TTACGCAGCA CCCGATAGCA GGAAGACAGT GGCTGCCGGA TGACGCTATC
AAACCGGCCA ACATACCGGG CCGCCAGGCA AAGCTGCTGC TGTTCGGCCG GGTTTTGCCC
CTGACCGCCC GCAGCATCAC CCTCACCTTC CTGCTGTTCG GCGGCATCTG GACCATCTCG
GCCGGGCTGC TTGAACGGCA ACTCAATCTG CCGGAAGGGC TGTCATACCT GACACATATT
GCCGCAGGGG CCGGGCTGCT GCTGATCACG GCGGCCATGC TCTACCTGCT GATCCGGCGC
TTTACCCGAA ACGATTCATC CTCCCATGAG CTGATCATCA GGGCCTTTCA TGCCTCTCCC
AACGGTATTG CAGTGGTACG GGACCAGGAC CGCCGGATCC TGTCGGTCAA CCAGCGCTTT
GCCGCTATGA CCGGCTACGC GGTTGCCAGC ATTGTGGGAC ACAGTGACAG CGACCTGAAG
CTCTGGGAAC ACAGTTCGGA ACGGCTGGAC CTGATCCGTC AGATCCGCAG CAACGGCGCG
GTTCAGGGAC TGGAGGTCAC CCTGCGGCGT CAGGACGGCT CCCTGCTGAC CGGGTCGATT
TCTGCCCACC GGATCCTGTT TGAAGGAGAC TCCTGCACCA TCATCTTTCT GGAGGATATC
ACCCTGCTGA AGCAGGCCGC CCGCAAGGTG GAAGAGCTGA CCCGCTATGA CGCCATCACC
GGCCTGCCCA ACCACAAGCT GCTCAGCGAC CGTCTGGCCC AGCTGCTGGC CATCAGCAGC
CGCGAAGAGC AGGCCCTGTC GGTGCTGAAG CTGGTGCTGG GGCGCTGCCC CGGTGCGATC
AGCGCACGGG GTGGCGACGA CTGTGACGAG CTGCTGCGCA GCGTGGCCGA CCGGCTGCAG
GATGTCCTGC GCGAGACCGA CACCCTCGCG GTGCTGCAGA AGGGTGAATT CGGCATCCTG
CTGCCCAAGA GCGGCAGCGA ACGGGATATT CTGCCGGTCA TCACCAAACT GCTTGATGCC
ATCAATGAGC CGTTCAGCCT GCATGACGCC GAATTTCAGC TGAACGCCCA TATCGGCATT
GCCATCTTTC CCGGTGACGG ACGCAGCGGC GAGGTGCTGC TGCAGCATGC CCACCTGGCG
CAGCTCCAGG CGCAGTCCAA GTCGATTGCC GGTGAAAGCG GCTTCAAGTT CTATGCAGAA
GAGATGAACC AGGCGGTCAG GGAACAGATG CAGATTGAAT CAAGCATCCT GCGGGGTTTA
CGGGCCGGGG AGTTCTTTGC CTGCTATCAG CCGTTGTTCA GCCAGGACGG CAAAAAACTG
GTCGGGATGG AAGCACTGGC CCGTTGGCAG CACCCCACCC TGGGGCTGGT GGGGCCGGAC
AAGTTTATTC CGGTGGCTGA GGCCAACGGC GCCATTGTGC AGCTGGGAGA CCGGATGCTG
GAACTGGCCC TGCAGAACTG TAAACAGTGG CGGGAACAGG GCTATCCCCA CCTGACTGTT
GCCGTCAATG TCTCGACCCG CCAGCTAAAG GACCGCCAGT TTGCAGAGCG GGTCGCCCGT
CAACTGCAGA TGGTGGGGTT GCCACCTGAT GCACTCTGCT GTGAGCTGAC CGAATCGCTC
TTGATGGAAC ATTCCAATGA AAACACCGAG CAGATCTTCA GGCTGAAGGA GCTGGGGGTT
AAACTGGCCA TTGACGACTT TGGCACCGGC TATTCGTCCC TGACCTATCT GAAACACCTG
CCGGTGGATC GGATCAAGAT TGACCGTTCC TTTGTGAACG AGCTGGACAG CAACCCCGAT
GACCGGGCGA TTGTGGTTGC CATCATTGCC ATGGCCCGCT CACTGCACCT CAAGGTAACG
GCAGAAGGGG TGGAGACCCC CAGCCAGCAC CAACTGTTGC AGGAACTTGG CTGCGACACC
ATGCAGGGCT ACTACTTTGG CAAACCGATG CAGCGTGAGG CATTTGAACT CTTTTTGCTG
AATGGCGCGC AACTGCTTGC CGGTGAGCCG TCTGACCCGC AGCCTGAACA GATCGGGCAG
GAACTCACCC CTCCGGCAGC CATGCCAGTA CCCCAGGAAG AGGATGATCG CTCGCTGCAG
ACCGTTGCCG ACATAACCCT GCATATCGAG CCGCTCAGAC CGGCTGACCG TCTGAACACC
GCCCTGGAGC GATTTCAGAC CGACAAACGG CTGCAGGTAC TGCCGGTGGT GGATCAGCAC
CGGGTAGCGG GAGTACTGAA CCGCTCCGAG TTCATCGAAG AGCAGATTGT GGGGCGGATC
GGCTACGCAT TTCATATCAA CCACTCCAAA AAGGTACGCG ACCTGATGCA GCCGGTGCCG
CTGGTGATTG AGTCTGACGC CAGTATTGAA GAGGCGGCCC AGGCGCTGCA CGGCAACTTT
GGCACCATGC GGCTGGAGAA CATCTGCGTT GCCAGGCGCG GCGTCTACCG GGGCATTCTG
GATGTCCGCA CCCTGGTGGA GGCGATCACC GCCCTGAACC TGAAGCTGGC CAAGGGGGCC
AACCCGCTGA CCGGCCTGCC GGGCAACGAG AGTATCCAGC GTGAGACCAC CCGGCGGCTG
GAGTCCGGCA TGCCGTTCGA CATCGCCTAC ATCGATATTG ACCACTTCAA GCCATACAAC
GACTTCTACG GCTTTGAGCG GGGCGACATG GTGATCCAGG TGGTGGGGGA TATCCTGAAA
TTTCACGCCG ATGAGCTGCT GCAGGGCAAG CAGGCCAGGA ACTTCTGCGG ACATATCGGC
GGTGACGACT TCATCATCAT CACCGGCCCC GGCTACGCCG CCGCCCTATC CCGCCAGGTG
ATCGCCGAAT TTGACGCACG GCTGCCGCTG CTGCACGGTT CCAGCGACTA CGCCAAGGGC
TGTTACACCT CCTTCAACCG CAAGGGTGAG CTGGAGACCT TCAGCCTGCT GTCGCTTTCA
GTGGCGGTGA TCAGCACCGG GCAGCTGCAG ATCAGCTCCT ATGCCCAGCT GGCCTCCATG
GCCAGCGAGG TCAAAAAGAC CGCCAAGAAG GTCAGGGGCT CGTCGGTGGC GGTTAAAGAC
AGTTACGAGG CGCCCCGAGT GGTGCTTGGC ACCCTGCCGG CAGAAGCATA A
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| Protein sequence | MHTVTQHPIA GRQWLPDDAI KPANIPGRQA KLLLFGRVLP LTARSITLTF LLFGGIWTIS
AGLLERQLNL PEGLSYLTHI AAGAGLLLIT AAMLYLLIRR FTRNDSSSHE LIIRAFHASP
NGIAVVRDQD RRILSVNQRF AAMTGYAVAS IVGHSDSDLK LWEHSSERLD LIRQIRSNGA
VQGLEVTLRR QDGSLLTGSI SAHRILFEGD SCTIIFLEDI TLLKQAARKV EELTRYDAIT
GLPNHKLLSD RLAQLLAISS REEQALSVLK LVLGRCPGAI SARGGDDCDE LLRSVADRLQ
DVLRETDTLA VLQKGEFGIL LPKSGSERDI LPVITKLLDA INEPFSLHDA EFQLNAHIGI
AIFPGDGRSG EVLLQHAHLA QLQAQSKSIA GESGFKFYAE EMNQAVREQM QIESSILRGL
RAGEFFACYQ PLFSQDGKKL VGMEALARWQ HPTLGLVGPD KFIPVAEANG AIVQLGDRML
ELALQNCKQW REQGYPHLTV AVNVSTRQLK DRQFAERVAR QLQMVGLPPD ALCCELTESL
LMEHSNENTE QIFRLKELGV KLAIDDFGTG YSSLTYLKHL PVDRIKIDRS FVNELDSNPD
DRAIVVAIIA MARSLHLKVT AEGVETPSQH QLLQELGCDT MQGYYFGKPM QREAFELFLL
NGAQLLAGEP SDPQPEQIGQ ELTPPAAMPV PQEEDDRSLQ TVADITLHIE PLRPADRLNT
ALERFQTDKR LQVLPVVDQH RVAGVLNRSE FIEEQIVGRI GYAFHINHSK KVRDLMQPVP
LVIESDASIE EAAQALHGNF GTMRLENICV ARRGVYRGIL DVRTLVEAIT ALNLKLAKGA
NPLTGLPGNE SIQRETTRRL ESGMPFDIAY IDIDHFKPYN DFYGFERGDM VIQVVGDILK
FHADELLQGK QARNFCGHIG GDDFIIITGP GYAAALSRQV IAEFDARLPL LHGSSDYAKG
CYTSFNRKGE LETFSLLSLS VAVISTGQLQ ISSYAQLASM ASEVKKTAKK VRGSSVAVKD
SYEAPRVVLG TLPAEA
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