| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0600 |
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| Symbol | |
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| ID | 6368036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 592165 |
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| End bp | 594174 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642675992 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001950847 |
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| Protein GI | 189423670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGG GCAGCAGCGT GGATAGGCAG CTCAGCCAAC GAACCGGCCA GCACTGGCTT
GCGCTGATCG TCGCCCTGGC CCTGATCGGC AGTATCATCG CCTACAACCT GGCCACCATG
CGCCATCGGA CCATCAGCCA GGAAAACCAG CGGCTGATGA CCCAGGCCAG GGTAATCGGT
CAGAATATCC AGCGTCAGCT TGAAGCAACC AGCCGGGCCC TGAAAGGGGT GATCAGCGAT
CTGCCCGGAT TGCAGGGCTC CCAAAACCTG GCCCAGGCCA ACAAGCGCCT GAGTGTGCTG
GCCGATGCCA TGCCCGGTAT ACGCACCCTG TTTTTTACTG ATACCAAGGG AAACATTCTG
GCTGCCAACC GCCCGGAACT GATCGGACGC AATGTTGCCG GCCGGCAGTA TTTCAGTGAG
CCGCAGCAGC ACCCCAATCC CGATACGCTC TACATCTCGC CCCCCTTCAA ATCGGTGCTG
AACGCCTATG TTTTCGACAT TACCAGAATG ATACCCGGAC CGGATGGCCG TTTTGCCGGG
ATTGTCACCG CCGGGGTCGA CCCCGACTAC TTCGAGGTGA TCCTGCAGTC AACCCTCTAT
GCCCCGGATA TGTGGAACAC CATCAACCAC GGTGATGGCA TCCGTTTCAT GACCATGCCG
TACCGTGAAG GGCAGGCCGG CAAAAACCTG GCCGTACCCG GTTCCCTGTT TACCCGCCAC
AAAGAGAGCG GCCAACCGGA AAATATCTTT ACCGACACCG CCTATGCCAC CGGCGAATAC
CGCAAGGTGG CCCTCTTGAC CCTGCAGCCA AAAGAACTGC AGATGGACAA ACCGCTGGTG
GTGATCATCA GCCGCAACCC GGACGCAATC ATGAAGAACT GGAAGAATGA GGCGATCTTC
CAGGGGCTGC TGTTTCTAAT GACCTGCATC GGCAGTTCAG CCGCTCTGTC CCTGCTGCAC
CGGCGTCAGG CGTTGTTTGA GCAGAAGGCC CAACGGGCAG AGGCGATGGT ACAGATCCGC
TACCAGCTGC TGGAATATGC CACCATGCAT ACTGTTGATG AACTGCTGCA GTACGCCCTG
GATGAGGTTT GCCGGATCAG TGACAGCCCG GTGGGATTCT ATCACTTTGT TGACCCGGAC
CAGCAGGCCC TGACCCTGCA GGCCTGGTCC ACCCGCACCC TGCAGGAGTT CTGCAAGGCT
GAAGGACACG GCATGCACTA CGGCGTTGAC CAGGCCGGTG TCTGGGCCGA GTGCGTCCAG
ACCCGCGCCC CGGCAATTCA CAACGACTAT GCCGCTCTGC CCAACAAAAA GGGACTGCCC
CCCGGCCATG CGCCGGTCAT CCGGGAGCTG GTGGTACCGG TGATCCGGGA TGAACGGATT
GTGGCGGTGC TGGGGGTGGG CAACAAGGGC AATAATTACA CCACCAGAGA TGCCGAAGAG
GTCGCCTACC TGGCTGACGT GACCTGGGAG ATCATCGACA GCCGCCGGGC CCAGCAGGAA
TTGAAACATG CCAACGAACT GCTGGCAACC GAGGCCCGGA TCGATTTTCT GACCGGCATT
TACAACCGCC GGATGTTTGA CGGTCTGCTG GTGGCCGAGA CCGCCCGTGC CTGCCGCTAT
AACTCTCCCT TGTCGCTGAT CATGCTGGAT CTCGATCACT TCAAGCAGAT CAACGACACC
CAGGGGCATG CCGCCGGGGA CCATGTGCTG CAGAAGGTTG CCGAACTGAT TTCCGGCAGG
ATCAGGAGCC ACGACATCTT CAGCCGCTGG GGCGGCGAAG AGTTTGTGAT CCTGACCCCC
AAAAACGACA CAGCCCAGGC TGCGGTGCTG GCTGAGATCC TGCGGGACAT GATCGAGCAG
TATGACTTCG GCAACGGCCT GCGGCTCACC TGCAGCTTCG GGGTTACCCG GCACATCTGC
GGAGAACCGG CAGAGGTCTT TATCGAACGC GCCGATACCG CGCTCTACCA GGCCAAACAT
AACGGCCGCA ACCGGGTGGA AACGGCCTAA
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| Protein sequence | MTPGSSVDRQ LSQRTGQHWL ALIVALALIG SIIAYNLATM RHRTISQENQ RLMTQARVIG
QNIQRQLEAT SRALKGVISD LPGLQGSQNL AQANKRLSVL ADAMPGIRTL FFTDTKGNIL
AANRPELIGR NVAGRQYFSE PQQHPNPDTL YISPPFKSVL NAYVFDITRM IPGPDGRFAG
IVTAGVDPDY FEVILQSTLY APDMWNTINH GDGIRFMTMP YREGQAGKNL AVPGSLFTRH
KESGQPENIF TDTAYATGEY RKVALLTLQP KELQMDKPLV VIISRNPDAI MKNWKNEAIF
QGLLFLMTCI GSSAALSLLH RRQALFEQKA QRAEAMVQIR YQLLEYATMH TVDELLQYAL
DEVCRISDSP VGFYHFVDPD QQALTLQAWS TRTLQEFCKA EGHGMHYGVD QAGVWAECVQ
TRAPAIHNDY AALPNKKGLP PGHAPVIREL VVPVIRDERI VAVLGVGNKG NNYTTRDAEE
VAYLADVTWE IIDSRRAQQE LKHANELLAT EARIDFLTGI YNRRMFDGLL VAETARACRY
NSPLSLIMLD LDHFKQINDT QGHAAGDHVL QKVAELISGR IRSHDIFSRW GGEEFVILTP
KNDTAQAAVL AEILRDMIEQ YDFGNGLRLT CSFGVTRHIC GEPAEVFIER ADTALYQAKH
NGRNRVETA
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