| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0562 |
|---|
| Symbol | |
|---|
| ID | 6367768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 535805 |
|---|
| End bp | 538036 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642675955 |
|---|
| Product | integral membrane sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001950810 |
|---|
| Protein GI | 189423633 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.1893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC TGATTTCCCT TAACAGTAAG CTCAGCCGCA GCCTGATCAT CTTCGGGCTC
TTTGCCTTTC TGCTGGCAAG CGTCATCCGC CTGACCCTGC GGCTGGCAGA AGAAAAAAAG
TATTACGCCA CCACCATGAT GAACACCCTC AAGACCTGCA AAGGGGTGCT TGAGGACTAT
CTGCATACCT ATGACCGGGA TGTGGAGGAG GTGAAGAGGC GGCATCTGCA TGCCGGAAGT
ACGGATGCAG AGGTGGTGCA GTATCTGAAG ACGCACCTTT CGCTGCGCAG CCGGGACCTC
TGGTATCTGC TGGATCAGCA CAACCGGGTG CTCTATGCCC CGTCTCGGTA TCGCTCCTTC
ACCGGACTTG ACTTCAGCCA TCTGGCACAT GTCAAGAACA GGCATTCGGT TTCGGAGGTG
CATCAGTCGC TCTTCAGCCA GCGCTCGGTG GTATCCCGCA GCTACCCTCT CTGTCCGACT
CATACGCTGA TCATTGAACA GGATCTGGAG AGCATTATTC CGTTATTCAG CCATGTCTCC
ACCATGAATG TCTATGGCCA GGGTATCCTG TTTGCCCTGA CGGCTGACGG CACGGTGGTC
TATCACCCGG ATAGCCGTCT TATCACCAGC AGGCACAACC TGGGTTTTGA GTTGCAGGGC
TGGACGCAGC CCGATAAATG GGGGCTCCGT AAGTGTCGCT ACAACGGTCA GACCTGGCTG
GTCTATACGG AGAAGACCAG CTATCCCCAG GGCTGGGCGA TCTACTATGC CGTGCCGTAC
GCGTCACTGC TCAAGGCGAT GGTGAAGCAG ACCGGCATTC AGCTGGTGAT TGTGGCGGCA
CTGTTTGCCC TGCTTGTGTA CCTGCTGAAG AGGCTGATCG AGACCAATCT GGCCGGCCCG
GTGCGGAACA TCGCCGCCTC CATTGCCGGT ATAAGACCGC TGGAAGCGGA GTCGGATATA
CCGCTGGAGC AGGCCGGCAA CATTACAGAG CTGCATGGGA TCATCAGTGA GGTCAATCAC
CTGATGAGTC AGGTCCGTCA ATCACATCAT CAGTTGACGG CTGCGCGGGA TGCTGCCGAA
TCTGCCAACC GCACCAAGAG CGAGTTTCTA GCCAACATGA GCCATGAACT GCGTACTCCG
ATGAACGGTG TGATCGGCAC GGCTCAGCTG CTGCGGATGA CAGAGCTGAA CGCTGAACAG
GCCGAGTATC TGGCCAGCAT TGAACATTCG GCCGACAGCC TGATGGCGTT GTTGAATGAT
ATTCTGGATC TCTCCCGGAT CGAGGCAGGA CGGCTTGAGC TGGAAAACCG TCCGTTTGGT
CTGCAGGAGG TGATCGGCAA TGTGGTGGAC TCACTTTCCG CCCAGGCCCG TTTGAAGTGG
TTGCAGCTGA GCGTCGAGTT TGACCGGAAT CTGCCGCAAC TGGTGCTGGG GGATTCGCTG
CGTTTCAGGC AGATACTGTT GAATCTGACC GGCAACGCGA TCAAGTTTAC CGACCAGGGG
GCGGTACTGG TCACGGCTGC CCTGAGCAGT GCTGATGAAG ACAGCGTCAC CCTGCATCTG
TGCGTGCAGG ACACCGGCAT CGGTATTACA GCAGAGGCGA TGCAGCGGAT CTTTGCCCCC
TTTACCCAGG CCGACAGCTC CAATACCCGC AAGTACGGCG GCAGCGGTCT GGGGCTCACC
ATCAGCCGTC ATCTGACCGG ATTGATGGGG GGGCGGCTCT GGGCTGAAAG TGAGCCGGGT
ATCGGTACCA CCTTCCACCT TGAGCTGCCG TTCCTGATCT GTGCGGCAGT TCCGGCTGTC
CCGGTTGCGG AGGCGGTTCC GGCACCTGTT GCCGCCCTGT GGGACGGTCC TGCGCTCTCG
ATCCTGCTGG CAGAGGATCA ACAGGTCAAT ATTGTCTTTG TGCGGCGGAT CCTGGACAAG
CTCGGCCATC GTCTGACCGT GGCTGAAAAT GGCGAACAGG CGCTCAACTG CTGGCAGTCT
GAGCGGTTTG ATCTGATCCT GATGGATGTG CAGATGCCGG TGATGGATGG CCGCTCGGCC
ACGGGCCGCA TCAGGGAGCA GGAACAGGCC GGCGGCGCAC GTATCCCGAT TATTGCCCTG
ACCGCCCATG CCATGGAAGG GGATCGGGAA CGGCTGCTGT CAGAAGGATT TGACGGCTAT
GTGGCCAAGC CGGTCGATAT CAAGCTGCTC TGCGCCGAGA TGGCGCGAGT CATCGCAAAG
GAGAGGGGAT GA
|
|---|
| Protein sequence | MKRLISLNSK LSRSLIIFGL FAFLLASVIR LTLRLAEEKK YYATTMMNTL KTCKGVLEDY
LHTYDRDVEE VKRRHLHAGS TDAEVVQYLK THLSLRSRDL WYLLDQHNRV LYAPSRYRSF
TGLDFSHLAH VKNRHSVSEV HQSLFSQRSV VSRSYPLCPT HTLIIEQDLE SIIPLFSHVS
TMNVYGQGIL FALTADGTVV YHPDSRLITS RHNLGFELQG WTQPDKWGLR KCRYNGQTWL
VYTEKTSYPQ GWAIYYAVPY ASLLKAMVKQ TGIQLVIVAA LFALLVYLLK RLIETNLAGP
VRNIAASIAG IRPLEAESDI PLEQAGNITE LHGIISEVNH LMSQVRQSHH QLTAARDAAE
SANRTKSEFL ANMSHELRTP MNGVIGTAQL LRMTELNAEQ AEYLASIEHS ADSLMALLND
ILDLSRIEAG RLELENRPFG LQEVIGNVVD SLSAQARLKW LQLSVEFDRN LPQLVLGDSL
RFRQILLNLT GNAIKFTDQG AVLVTAALSS ADEDSVTLHL CVQDTGIGIT AEAMQRIFAP
FTQADSSNTR KYGGSGLGLT ISRHLTGLMG GRLWAESEPG IGTTFHLELP FLICAAVPAV
PVAEAVPAPV AALWDGPALS ILLAEDQQVN IVFVRRILDK LGHRLTVAEN GEQALNCWQS
ERFDLILMDV QMPVMDGRSA TGRIREQEQA GGARIPIIAL TAHAMEGDRE RLLSEGFDGY
VAKPVDIKLL CAEMARVIAK ERG
|
|---|
| |