Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0557 |
Symbol | |
ID | 6367700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 525747 |
End bp | 526994 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642675950 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001950805 |
Protein GI | 189423628 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0349703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATT CTACCTCACA TCAGAGTCGC TTCCTGCACT ACGGCTGGGT CATTGTGGCG GTCGGCGTCC TGGTGCTGTT TTCCTGCCTG GGGCTGGCCC GTTATGCCTA CACCATGCTG TTGCCTGCCA TGCAGACCGG ATTGCAGCTG AGCTATGACC GGATGGGGCT GATCGGCACC GCCAACTTCA GCGGCTATCT GGTTGCCGTG GTGCTGTCTC CCTGGCTGCT CCGCCGTTTT CGCCCCCGGG CGGTGATCAG TGCCGGGCTG CTGTTGATCG CACTCTGCAT GGCCGGTATC AGCCAGTCCC GCGGTTTTTT GACGGCTGCA CTGCTCTACG CGTTTACCGG CCTGGGGGGT GGTCTTGCCA ATATCCCCCT GATGGCGCTG GTCCCCTGCT GGTTCCGCAG CCGGGTCCGC GGCCGGGCCG CCGGTCTGAT CATTGGCGGC AACGGTCTGG CCATTATCTG TGCCGGCTAT CTGATTCCGT TGCTTAATCG TCAGTATGCT GCTGCCGGCT GGCGTCTGGC CTGGCTGCTG CTGGCAGCCA TTACTCTGCT GACCGCCCTG ATTGCTGCCC TGTGGTTGCG TAATACGCCG GCGGAAAAGG GGCTGGAACC GCTGGGGCCG TTGCAGCCGG AACAGCACGG CAGCCTGCCC GTTCACCACG AGCAGCAGGG GGATGGCGTG TTGCTGCTCA GGCTGGGGCT TTTGTATCTG GCCTTTGGCG CAACCTTTAT GGTCTTCGGC ACCTTTATTG TCACCAGCAT GGTGCGGGAG TCCGGTTTCA GTGAGGCGCA AGCCGGCCAC TACTGGTCGT GGGTCGGCTT CTTCAGCGTC TTTTCCGGGG TCGGTTTTGG CAGCCTGTCT GACCGGATCG GCCGCAAGCA GGGACTGGCA CTGGTCTTTC TGGTGCAGAG CACGGCCTAC CTGTTGGCCG GACTCAAACT GGGGGCCATT GGCCTGATGC TTGCCATTGT CCTGTACGGT TCGGCCGTTT TTGCCATACC AGCCATCATG GCTGCTGCTG TAGGTGACTA TCTGGGCACC GCCCGGGCTG CCGCTTCCTT TGCCACCATT ACCATCTTCT TTGCCGTGGG GCAGACCATC GGTCCGGCCG TTGCCGGGTT GCTGGCGCGT AGCTACGGCA GCTTTGCTCC GGCCTATCTC TGCGCTGCCG CCATTACCTG TTCTGCGGCC CTGTTTTCCC TTGTGCTGCC TACGCCGCAC AGGCGTGATC CCGCTTGA
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Protein sequence | MSNSTSHQSR FLHYGWVIVA VGVLVLFSCL GLARYAYTML LPAMQTGLQL SYDRMGLIGT ANFSGYLVAV VLSPWLLRRF RPRAVISAGL LLIALCMAGI SQSRGFLTAA LLYAFTGLGG GLANIPLMAL VPCWFRSRVR GRAAGLIIGG NGLAIICAGY LIPLLNRQYA AAGWRLAWLL LAAITLLTAL IAALWLRNTP AEKGLEPLGP LQPEQHGSLP VHHEQQGDGV LLLRLGLLYL AFGATFMVFG TFIVTSMVRE SGFSEAQAGH YWSWVGFFSV FSGVGFGSLS DRIGRKQGLA LVFLVQSTAY LLAGLKLGAI GLMLAIVLYG SAVFAIPAIM AAAVGDYLGT ARAAASFATI TIFFAVGQTI GPAVAGLLAR SYGSFAPAYL CAAAITCSAA LFSLVLPTPH RRDPA
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