| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0545 |
|---|
| Symbol | |
|---|
| ID | 6367616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 516646 |
|---|
| End bp | 517806 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642675938 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_001950793 |
|---|
| Protein GI | 189423616 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCCT ATCAGATCGC CTTAAAAAAC CTGATCCGCC GGCCTGCCCG GATGTTCTTC
CTGACCGTGG CGCTGGCAGT GGGGCTGGCT GCAGTGGTGG CGCTGGTCAC CCTCTCAAAC
TCCATGACTG CTGATATTGA ACACACCATG GACCAGTTCG GGGCCAATAT CCTGATCACC
CCCAAGAGTA ATGATCTGGC CCTCTCCTAC GGCGGCATCA GCCTGGGACG TGTCTCCTTT
GACCAGCGAG AGCTTGACCC ATCGGTGCTG GAGCGGATCC GCACCATCAA GAACCACCAG
AACATCGCCG CCGTTGCCCC CAAGGTGCTG GGAACGGTGA CTGTGCAGGG CAGGGAGCTG
CTACTGGTGG GGGTGGATTT TGCGGCTGAA CTGCGGATGA AACCCTGGTG GCGGTTAACC
GGTGCAGAGC CGTCGGCTGC TGATGATGCC CTGCTGGGTA ATAGCGCTGC ACGGGTGTTG
GGGGTAAAGC CGGGTGACCG GCTCACAGTA GGGGGCAGAT CGTTTAAGGT AGCTGCACTT
TTGCAGGAGA CCGGCTCTCA GGATGATGGC CTGCTGTTTG TACCGTTGGC AGCAGCCCAG
GCCATAACCG GCAAACAGGG CAAGATCACG CTGATCGAAG TGGCGGCACT CTGCTCCGGC
TGTCCGATTG GTGAGATGGT GGAGCAGATT GCCGGGGTGC TGCCGGACGC CAGGGTCAGC
GCCATCAAAC AGGTGGTGGA GGGGCGTCTG CAGACCATCG GCCAGCTCAA GCGGTTCTCG
CTGGGGATGG GTGGGGTGAT CGCCCTGATC GGTCTTCTGG TAGTCTTCAT CACCATGATG
GGCAATGTCA ACGAGCGTAA GGTAGAAATC GGCATCTTCC GGGCCATCGG CTACCGCACC
GGTCATGTGA TGGGGATTAT CCTGCTTGAG GCCGGGCTGG TGGGGCTGGT GGCAGGCCTG
ACAGGCTACC TGCTGGGGGT CGGAGCCGCC GCCGTGACAC TGCCACTGCT GGCGCAATCC
GGTCACCCGC ACCTGCTGCT GCAGTGGCAG GTGGCCCTTG CCGCCATTGC TGCCGTGGGG
CTGGTCAGCC TGCTGGCAGC TGTCTACCCG GCCCGCCGGG CTGGCAGGAT GGATCCGGCC
GATGCACTTC GTAGTCTGTA G
|
|---|
| Protein sequence | MRPYQIALKN LIRRPARMFF LTVALAVGLA AVVALVTLSN SMTADIEHTM DQFGANILIT
PKSNDLALSY GGISLGRVSF DQRELDPSVL ERIRTIKNHQ NIAAVAPKVL GTVTVQGREL
LLVGVDFAAE LRMKPWWRLT GAEPSAADDA LLGNSAARVL GVKPGDRLTV GGRSFKVAAL
LQETGSQDDG LLFVPLAAAQ AITGKQGKIT LIEVAALCSG CPIGEMVEQI AGVLPDARVS
AIKQVVEGRL QTIGQLKRFS LGMGGVIALI GLLVVFITMM GNVNERKVEI GIFRAIGYRT
GHVMGIILLE AGLVGLVAGL TGYLLGVGAA AVTLPLLAQS GHPHLLLQWQ VALAAIAAVG
LVSLLAAVYP ARRAGRMDPA DALRSL
|
|---|
| |