| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0540 |
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| Symbol | |
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| ID | 6367606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 511363 |
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| End bp | 513711 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642675933 |
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| Product | Spermine synthase |
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| Protein accession | YP_001950788 |
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| Protein GI | 189423611 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAC AGTTCCGCTT ACTCCTGCTG AGCCTCTTGT TCCTCTCCGG GTTCACCGGA
CTTTGCTACG AAATCTGCTG GATCAGGGCA GCCGGCAGGA TATTCGGAGC CACAGCCTTT
GCCGTCAGTT CCGTGGTTGC GCTGTTCTTT GCCGGAATGG CGCTGGGTGC GCACTATTTC
GGCAACTGTG TGCAACGGTG GAAACAACCG TTACGGGTCT ACGCACTGCT TGAGATCGGC
ATCGGCACCG GAGCCATGCT CAGCTTGCCC CTGCTGACCC TGCTTGAACA GCCGTACCAG
CTGCTCTACC AAGCCGGTTT TCAGAACGAT AGCACCCTGG CACTGACTCG TCTGCTGCTG
ATCGGTCTGA TCATCATTCC GCCGACCTTT CTAATGGGGG GAACACTACC GCTCTTTACC
CAGTTTTACG ATACAGCAGG CAAGGAGCTG GGATTTCTCT ATGCCCTGAA CAGCCTCGGT
GCAGCAGCCG GTTGCCTGCT CTGCGGCTTT ATCTTGCTGC CGATGCTCGG CATCAGCAGC
ACGCTGCTGC TGATCGGCCT GATGGCCCAG GGGACGGGGC TGCTTCTGCT GTACCTGCTG
AAATATGATC CGCATTCCGT AGCTATCCCT GCAGCAGTTA CAGCCTTTCC TGACCGGAGC
TTTAATTCAA CCGGACAGGC GCTGCTGTAT CCCGTTATCT TCGGCACCGG CTTCTGTGCA
CTTTCTTACG AGATCATCTG GACCCGCTTT CTGTCGCTGA TCACCCACAA CACGGTCTAT
ACCTATACCA TCAGTCTGCT GGTAACCCTG CTGGGGATAA GTGCAGGCAG CATACTGGCC
CGCCTGCACC GGCCCGCCCT GCGCCACCCG ACTGCATTGG CTGCGGCCTA CATCCTGAAC
TCGCTGTTTG TTCTGCTATC GCTACTACTG CCGACAGCGG CCTGGGACTG GGCCGGATCA
AGCGAATCAC CGGTGATGGT ACTGCTGATC TGTCTGGCGC TGATGTTTAT TCCGGCGCTC
TGCTCCGGTC TCACCTTTCC TTTGCTGTTT GATCTGATCA GGCAGGCACG TTACAGCAGC
GGCAAACGTG TGGGGAGGCT GCTTGCTGTC AACACAGCGG GCTGTGTTGC CGGTTCGCTG
TTGACCGGCT TTATCCTGCT GCCGTTGCTG GGCATGCACG CCACCCTGCT GGTTACCACC
GGCCTGTGTC TGCTGTTGGG AATTCTAGTC ATGCTCTTTT TTGAGCGGGG CAGACCCTGG
CGGGTCAGGG GGCTGATTGC GTGCGTCAGC CTGGCGGCGT GGCTGTGCCT GATCAGCACA
ACAACCGTAC ATCTGCCGCA GAGTTATCTG GCCAAGGGGA AAAAGCTGGT CGATTACGTG
GAGGGCAAGA ACAGTTTTAT CTCTGTGGTT CAAAAAAACG GCGATCTGAC CATGGAGTTG
GATCGTCTGT GGCAGGGCAA GAAAGGCACC GGGCACCAGA TCATGGCGGC CCACCTTCCG
ATGCTGCTCC ACCCGGCTGC ACAGGAGATC CTGGTGGTTG GGATCGGCGC CGGACAGGCG
CCAAGCAGGT TCCTCTACTA CGACATCACC CGCCTGGATT GCGTGGATAT TGAAAGCAGC
CTTCCGCAGG TGCTCAAGAA GCATTTTCAG GGAAGCTGGC TCAACGATCC ACGGGTCTCA
TTCATTGCCG AAGACGGTCG CACCGTGGCA CGGTACGGCA AGCGGCGGTA TGACCTGATC
TCGGTTGAGG TGGGGCAGAT CTTCAGGCCG CAGGCATCGG CCTTCTATAC CCTTGAATTT
TATCGCAACG CCAGGGAAAA ACTGGCTCAG GACGGCATCA TCGCCCAATT TCTGCCGGTC
GGCTTCTTCA ACCAAGACCA GCTCAAGTCG GTGATCAGAA CCTTTCTGGC AGTGTTCCCC
CACAGCACCC TCTGGTACAA TCAACATGCC GAACTGTTGC TGATCGGTTC CCCCGACAGA
GATTTAGCGA TTCGGGCGGA AGGGGTCAGG GTATTGAAGC AGAACAGCAG GGTACGTGCC
GAACTGTTCT TCGGCTACCC CGGCACCGAG GAGCATTTTT TGAATCTGCC GGAAGTGCTG
GCTGCAAGCT TCCTGATGGG GCCGAAAACT CTGGCAAATA TCTCGACAGA CGCCCCTCTT
CTAAGCAACG ACAGGCCAGT GCTTGAATAC GGAACCGCAC GGACAACCTA TGCGCCACAA
CGTTTCAAAA AACTCTTTAC CGAGCAGTAT GACTCACCAC GCAGTATCAT CAAGTTTACC
GATCCCGAGG CAATACTGCC GAAAAGCACC AGAATCCAGG AATACTACCT AACTAACGGG
TTTAACTGA
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| Protein sequence | MTRQFRLLLL SLLFLSGFTG LCYEICWIRA AGRIFGATAF AVSSVVALFF AGMALGAHYF
GNCVQRWKQP LRVYALLEIG IGTGAMLSLP LLTLLEQPYQ LLYQAGFQND STLALTRLLL
IGLIIIPPTF LMGGTLPLFT QFYDTAGKEL GFLYALNSLG AAAGCLLCGF ILLPMLGISS
TLLLIGLMAQ GTGLLLLYLL KYDPHSVAIP AAVTAFPDRS FNSTGQALLY PVIFGTGFCA
LSYEIIWTRF LSLITHNTVY TYTISLLVTL LGISAGSILA RLHRPALRHP TALAAAYILN
SLFVLLSLLL PTAAWDWAGS SESPVMVLLI CLALMFIPAL CSGLTFPLLF DLIRQARYSS
GKRVGRLLAV NTAGCVAGSL LTGFILLPLL GMHATLLVTT GLCLLLGILV MLFFERGRPW
RVRGLIACVS LAAWLCLIST TTVHLPQSYL AKGKKLVDYV EGKNSFISVV QKNGDLTMEL
DRLWQGKKGT GHQIMAAHLP MLLHPAAQEI LVVGIGAGQA PSRFLYYDIT RLDCVDIESS
LPQVLKKHFQ GSWLNDPRVS FIAEDGRTVA RYGKRRYDLI SVEVGQIFRP QASAFYTLEF
YRNAREKLAQ DGIIAQFLPV GFFNQDQLKS VIRTFLAVFP HSTLWYNQHA ELLLIGSPDR
DLAIRAEGVR VLKQNSRVRA ELFFGYPGTE EHFLNLPEVL AASFLMGPKT LANISTDAPL
LSNDRPVLEY GTARTTYAPQ RFKKLFTEQY DSPRSIIKFT DPEAILPKST RIQEYYLTNG
FN
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