Gene Glov_0394 details

Gene Information

• Locus tag: Glov_0394
• ID: 6366091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 370521
• End bp: 372479
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642675786
• Product: ABC transporter related
• Protein accession: YP_001950642
• Protein GI: 189423465
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGC CGCTCCTTGA AATAGATGCC GTGGTGCGCC GGTTCTCAAC CGGTGGCCAG 
CAGGTGGAGG TCCTCAAGGG GATCGACCTG ACCATCCATA GCGGAGAGAT GGTGGCCATT 
ATCGGTGCCT CCGGTTCGGG CAAGTCCACC CTGATGAATA TCCTGGGCTG CCTGGACCGT 
CCCAGTGAGG GGAGCTACCG GATCGACGGC CGGGAGACCG GCAGCCTGTC AAATGACGAA 
TTGGCCAGTC TCAGGCGTGA CTACTTCGGA TTTATCTTCC AGCGCTACCA CCTGCTGCCC 
CACCTGACCG CCATTCAGAA TACCGAGATA CCGGCCATCT ATGCCGGCGC GAACAAGCAT 
CTCCGGCAGG AACGTGCCAG AAAGATCCTT GAACGGCTTG GCCTGGGAGA CCGGTGCGAT 
CACCGTCCCA ATCAGCTTTC CGGTGGCCAG CAGCAGCGGG TCAGTATTGC CAGGGCGTTG 
ATGAACGGCG GTGACGTCAT TCTGGCGGAT GAGCCAACCG GCGCCCTGGA CAGCAAGAGC 
GGCAAAGAGA TGATGGAGGT GCTGCATGAA CTGCATGCCA GTGGCCATAC CATCATCCTG 
GTTACCCACG ATCAGCAGGT GGCCGCCCAT GCTGAACGGA TCATCGAGAT CAGTGACGGT 
GCGATTATCC GCGACCAGGC GAACCCGAAA CGGCAGGCTT CAGTAACTGC CGCACTGGCG 
GAAAAGGTTG CTGTCAAACA GGCGGCTAAC TTCCTGCAGG CCAACTGGGG CAGATTTGCC 
GAAGCCTTCA AAATGGCCCT GATCGCCATG CTGTCCCACC GCATGCGGAC CCTGTTGACC 
ATGCTGGGGA TCATCATCGG CATAACCTCG GTTGTTTCTG TCGTGGCTCT TGGCCAGGGA 
GCGCAACAAA AGGTCATCAA GGATATCAGC GCCATGGGCA CGAATGTCAT CGACGTCAAC 
CCCGGCAAGG ACTGGGGGGA TGAAGACGCT GCCGGTATCC AGACCCTTGT GCAATCGGAT 
CTGGAGGCCC TCAAGGCGCA GGTGTATGTA GACAGCGCCT CGCCCACAAC CGGCGGCAGC 
CAATTGCTGC GCTACCGCAA CCTGACCGCC AATGCTTCGG TGAATGGCGT CGGTGAACAG 
TACTTCCGGG TCAAGGGGTA TGAGATTGCC GATGGCATCG CCTTCAGCGC CGCCGACGTC 
AAACAGCAGG CCCAGGTGGT GGTCATTGAC CAGAATACGC GCAAAAAGTT CTTCAGCAAC 
CAGGACCCGA TCGGCATGAT TCTGTTTGTC GGCTCGTTGC CCTGCCGGGT CATCGGTATC 
ACCAAAGTCA AAGACGGCCC CATGGGAAAC AGCTCGAATC TAGAGGTCTG GATACCCTAC 
ACGGCTGCCA TGAACCGGCT CCTGGGGCAG CAGTATTTCA GCTCGATTAC GGTGCGGGTC 
AAGGATGGCA TCTCCAACCC GGTTGCAGAA CAGAGTATCA CCAGGCTGGT CACCCAGCGC 
CATGGCCGCA AGGACTTCTA CACCAACAGC AGCGACAGCA TCATGAAGAC CATCAACAAG 
ACCACCACCA CGCTGAAGCT GATGATCTCG GCCATTGCCG TGATTTCGCT GATTGTCGGC 
GGCATCGGCG TCATGAATAT CATGCTGGTA TCGGTCACGG AGCGGACCCA CGAGATCGGC 
ATCCGGATGG CGGTCGGAGC GCGTCAGGAG GATATCATGC AGCAGTTTCT GATCGAGTCG 
GTTCTGGTCT GCCTGCTGGG GGGGATGATC GGCATCATCT GTTCCTGGGG CGTGGCAAAG 
GTGTTCTCGC TGTTCGTAAC CAGTTTTGCC ATGCAGTTTT CGCTCATGTC GATTGTCTCG 
GCCTTCCTCT GTTCAACCAT GATCGGCGTC ATCTTCGGCT TCCTGCCGGC CCGTAATGCG 
GCCCGCTTAG ACCCGATCGA AGCACTAGCC AGGGAGTAA 

 

Protein sequence

MAKPLLEIDA VVRRFSTGGQ QVEVLKGIDL TIHSGEMVAI IGASGSGKST LMNILGCLDR 
PSEGSYRIDG RETGSLSNDE LASLRRDYFG FIFQRYHLLP HLTAIQNTEI PAIYAGANKH 
LRQERARKIL ERLGLGDRCD HRPNQLSGGQ QQRVSIARAL MNGGDVILAD EPTGALDSKS 
GKEMMEVLHE LHASGHTIIL VTHDQQVAAH AERIIEISDG AIIRDQANPK RQASVTAALA 
EKVAVKQAAN FLQANWGRFA EAFKMALIAM LSHRMRTLLT MLGIIIGITS VVSVVALGQG 
AQQKVIKDIS AMGTNVIDVN PGKDWGDEDA AGIQTLVQSD LEALKAQVYV DSASPTTGGS 
QLLRYRNLTA NASVNGVGEQ YFRVKGYEIA DGIAFSAADV KQQAQVVVID QNTRKKFFSN 
QDPIGMILFV GSLPCRVIGI TKVKDGPMGN SSNLEVWIPY TAAMNRLLGQ QYFSSITVRV 
KDGISNPVAE QSITRLVTQR HGRKDFYTNS SDSIMKTINK TTTTLKLMIS AIAVISLIVG 
GIGVMNIMLV SVTERTHEIG IRMAVGARQE DIMQQFLIES VLVCLLGGMI GIICSWGVAK 
VFSLFVTSFA MQFSLMSIVS AFLCSTMIGV IFGFLPARNA ARLDPIEALA RE