| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0295 |
|---|
| Symbol | |
|---|
| ID | 6366951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 267954 |
|---|
| End bp | 268418 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642675687 |
|---|
| Product | DNA mismatch endonuclease Vsr |
|---|
| Protein accession | YP_001950544 |
|---|
| Protein GI | 189423367 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
|---|
| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA TTGTTGACAA GGAAACCCGG AGCCGGATGA TGTCAGGTAT CCGGGGGAAA
AACACAAAAC CCGAATTCCA CATAAGAAGC CTTCTCCACC GAAACGGTTT CCGATTCCGT
CTCCACACCA AAGACCTCCC CGGAAAACCC GATATCGTAT TTCCCCGCTA TCGCGCAGTA
ATCTTCATAA ACGGATGTTT CTGGCACGGA CATGACTGCC ACTTGTTTAA GCTCCCGGGC
ACCCGAACGG ATTTCTGGAA AACCAAAATA GCCCGTAATA AGGAGAACGA TAGCCGTGCT
ATGGGCTTGC TTGCTGAATC CGATTGGCGG GTTGCTACCG TCTGGGAATG CGCCCTTCGC
GGCAAATTTC GCATGAACGA CACCGTTATC ACTGAGCGAC TTGCTGGATG GATTCGGTCA
GCAGAAATCA AGCTGGAACT TCGCGGAATC CAACCAGAAG TATAA
|
|---|
| Protein sequence | MTDIVDKETR SRMMSGIRGK NTKPEFHIRS LLHRNGFRFR LHTKDLPGKP DIVFPRYRAV
IFINGCFWHG HDCHLFKLPG TRTDFWKTKI ARNKENDSRA MGLLAESDWR VATVWECALR
GKFRMNDTVI TERLAGWIRS AEIKLELRGI QPEV
|
|---|
| |