| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0287 |
|---|
| Symbol | |
|---|
| ID | 6368745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 259766 |
|---|
| End bp | 260854 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642675679 |
|---|
| Product | integrase domain protein SAM domain protein |
|---|
| Protein accession | YP_001950536 |
|---|
| Protein GI | 189423359 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG ATATCATCCC GACCGGTGGC CCCCATTCGG CACTGATCTC CAGCCAGATT
CCGGACAACC TGCCAGCGGA TCTTGAAGCC GCAGTACGCA ACTGGCTGGA ACGTGAAGTT
GCCCTGGGTG ATCCACGCGA AGACACGATC AAAACCTACA CGTCCCACCT CAACCATTGG
CTCCGCTGGT GTAACGCCCG TGGCATCACT CCGGCTGCCA TGACCCAGGC CGATGTGGAG
AGCTTTCGCC ATGAACTCAT CCAGGCCGGC ATGAAAGCAT CGTCAATCGC GGTAAAGCTG
ACCGTCATCA GACGATTTTA CCAGGTCGCC ATGAACCGGG GGTTGGTCGC CATCAATCCG
GCGGCCAATG TTCGCCCTCC TGTTGCCCGG GAAGCTAAAT CGGAGCAAAA ACATCTTACT
GCCGGACAGG CGGAACTGCT GATCATGCAC CTTCCCGTAC TTGGCAGCAT CAAAGGGTTG
CGCGACCGGG CCATCATTGC CCTTATGCTG CTCGAAGGAC TCCGGCGTGT CGAAATCAAA
CGGGCCAACG TCGAAGACAT CGAAGACGTC GAGGGCGGTG TGCGCATTCT GGTCCACGGC
AAGCGCAAAG ATGGTTATAT CTACCCCCGG GAAGATACAG TGGCCGCCAT CCGGGCCTAC
CTTGCTGCCA GGGGTGAGGT TACAGTCGAG GAAACCACCA TCCATCACCG GCAAGCGTTC
GTTACGCCAA TGTTTCTCAG CGTGCGCAAG AATGGCCGAG GCAGGGGCCG GATATCGCGC
ATCGGCCTCA ATAGTGTCAT TGACGGTTAC CTGAGCAAAG CCGGTCTGAA ACGGAAACGG
GTTTCCTGCC ATGCCCTGCG GCACACGTGC GGCACAATGT TATACGATGT CACCAAGGAC
ATCCGGGCCG TCCAGGATAC GTTACGCCAT GAGGACATCA GCACCAGCGC CATCTATGCC
GCCAGTGGCC GGGAGCATAA ACGCTTCACC AGAAAAATTC CTCTGGTAAT AACTACGGCA
CCGACACCGC CGGTTGATGA TTCATGCATA CCATCCGCTC CTGACCAGGA GACAGAGGAG
TCGCCATGA
|
|---|
| Protein sequence | MNNDIIPTGG PHSALISSQI PDNLPADLEA AVRNWLEREV ALGDPREDTI KTYTSHLNHW
LRWCNARGIT PAAMTQADVE SFRHELIQAG MKASSIAVKL TVIRRFYQVA MNRGLVAINP
AANVRPPVAR EAKSEQKHLT AGQAELLIMH LPVLGSIKGL RDRAIIALML LEGLRRVEIK
RANVEDIEDV EGGVRILVHG KRKDGYIYPR EDTVAAIRAY LAARGEVTVE ETTIHHRQAF
VTPMFLSVRK NGRGRGRISR IGLNSVIDGY LSKAGLKRKR VSCHALRHTC GTMLYDVTKD
IRAVQDTLRH EDISTSAIYA ASGREHKRFT RKIPLVITTA PTPPVDDSCI PSAPDQETEE
SP
|
|---|
| |