Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0250 |
Symbol | |
ID | 6367228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 228468 |
End bp | 229841 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642675642 |
Product | TraG family protein |
Protein accession | YP_001950499 |
Protein GI | 189423322 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGT CCTCATCGCA CCGTAGCACC ACCAACCCGG AATTCATGAC CTCCATCGGT AACGGAGTCC AGATGGAACG ACCGACCCGG ATCGTTCCGA TTTCGATCCC TGATGAATAC CGAAAACGGC ACATGTTCGT ATTTGGCACT ACCGGGGTCG GCAAAACGCG ACTCTGCGAG AACCTAATTG AGCAGGACAT CATGAAAGGC AACAGCGTGG TCTACTTCGA CCCCAAAGGT GACCAGCAGA TCTTCACCAA GATTTTCGAG GTTGCCCGTA GGGCGGAGAG ACTCAAGGAT TTGATGCTGG TAACGCCGAT TTTCCCGGAA TACTCAGCGG TCATCGATCC TATGGCCTAT TACTTCATGC CGGACGAACT CGTCGGCCAT ATCGTCTCAG GCATCCAGGG CGGACGTGAA CCATTCTACC GCAACATTGC AAAGGAAATC ACTACTGCCA TCATCTCAGC CAACATCATC ATCGCCGATT GGGAAAAACG TCTTCCCAAG CAAAATATGG ATACTATCAG ACAAAGCATT CGCCGCTCAT CATTGAGCAG CACAATGGGG CTACTGCAAG AAATCAAGAC ACCCGAGGCG CTGCTAAACG CCGGCATGAT CCAGGACATC CTTGAATCTC CCCAGGAGTA TTATTCGAAG GTGTCTTCAA CATTACGTAC CTGCTTGATG GAGCTTTCCT CCGGGAACAT CGGCAAGATT ATCGGTCAGG CCGACAGCAA CCGCTTCATC AGCCGACTTG AACGAAAGAA AGGGGTCATC ATGGTCGTGC ACACCGGCAC CATGATTACC AGGGAGGCAG CCACAACACT TGGCAAAGTC CTCTTGTCGA TGATCCAGTC TTTCATCGGC AGGGTCTATC TCTCTGACAA ACAGAAAGTA TTCCCACCAC TGTCCATCTA CATAGATGAG GCCCAGAGCC TGTTCTACCA AGGTATTGAG GACCTTTTCG CCAAGGCTGG ATCAGCAGAC GTAATGGTGC ACGCCTTCGC CCAGTCCGTG AACCAAATAT ATGCCGCCAT TGGTGAGGAA TACGGCAAAT CGATCCTCGA CAACACCAAC ACCAAGATCT TCATGCGCTG TTCTGATGCT GAAACATCCG AGTACGTCGT ACGGCATTTC GGCGTGCGCA ACGTGCTGAC CGGCATTTTC GGGTCCAACC AGGTCACTAC CCGTGAAGTG GAACAGGACA TTTTGAAAGT GCAGGATATT CTGGGGCTGC AACCAAGGGA ATTCTACATG CTGACCTACT CCGGTAGGTA CAAGGGTGTG ACTCGTGATG CCAGAGACCC GCAGTTGAAG ATAGTCTTCC CGTCGGCGCC ATCTTCCATA ACCATGAGCA GAGGGGCCGC ATGA
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Protein sequence | MFKSSSHRST TNPEFMTSIG NGVQMERPTR IVPISIPDEY RKRHMFVFGT TGVGKTRLCE NLIEQDIMKG NSVVYFDPKG DQQIFTKIFE VARRAERLKD LMLVTPIFPE YSAVIDPMAY YFMPDELVGH IVSGIQGGRE PFYRNIAKEI TTAIISANII IADWEKRLPK QNMDTIRQSI RRSSLSSTMG LLQEIKTPEA LLNAGMIQDI LESPQEYYSK VSSTLRTCLM ELSSGNIGKI IGQADSNRFI SRLERKKGVI MVVHTGTMIT REAATTLGKV LLSMIQSFIG RVYLSDKQKV FPPLSIYIDE AQSLFYQGIE DLFAKAGSAD VMVHAFAQSV NQIYAAIGEE YGKSILDNTN TKIFMRCSDA ETSEYVVRHF GVRNVLTGIF GSNQVTTREV EQDILKVQDI LGLQPREFYM LTYSGRYKGV TRDARDPQLK IVFPSAPSSI TMSRGAA
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