| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0250 |
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| Symbol | |
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| ID | 6367228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 228468 |
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| End bp | 229841 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642675642 |
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| Product | TraG family protein |
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| Protein accession | YP_001950499 |
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| Protein GI | 189423322 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGT CCTCATCGCA CCGTAGCACC ACCAACCCGG AATTCATGAC CTCCATCGGT
AACGGAGTCC AGATGGAACG ACCGACCCGG ATCGTTCCGA TTTCGATCCC TGATGAATAC
CGAAAACGGC ACATGTTCGT ATTTGGCACT ACCGGGGTCG GCAAAACGCG ACTCTGCGAG
AACCTAATTG AGCAGGACAT CATGAAAGGC AACAGCGTGG TCTACTTCGA CCCCAAAGGT
GACCAGCAGA TCTTCACCAA GATTTTCGAG GTTGCCCGTA GGGCGGAGAG ACTCAAGGAT
TTGATGCTGG TAACGCCGAT TTTCCCGGAA TACTCAGCGG TCATCGATCC TATGGCCTAT
TACTTCATGC CGGACGAACT CGTCGGCCAT ATCGTCTCAG GCATCCAGGG CGGACGTGAA
CCATTCTACC GCAACATTGC AAAGGAAATC ACTACTGCCA TCATCTCAGC CAACATCATC
ATCGCCGATT GGGAAAAACG TCTTCCCAAG CAAAATATGG ATACTATCAG ACAAAGCATT
CGCCGCTCAT CATTGAGCAG CACAATGGGG CTACTGCAAG AAATCAAGAC ACCCGAGGCG
CTGCTAAACG CCGGCATGAT CCAGGACATC CTTGAATCTC CCCAGGAGTA TTATTCGAAG
GTGTCTTCAA CATTACGTAC CTGCTTGATG GAGCTTTCCT CCGGGAACAT CGGCAAGATT
ATCGGTCAGG CCGACAGCAA CCGCTTCATC AGCCGACTTG AACGAAAGAA AGGGGTCATC
ATGGTCGTGC ACACCGGCAC CATGATTACC AGGGAGGCAG CCACAACACT TGGCAAAGTC
CTCTTGTCGA TGATCCAGTC TTTCATCGGC AGGGTCTATC TCTCTGACAA ACAGAAAGTA
TTCCCACCAC TGTCCATCTA CATAGATGAG GCCCAGAGCC TGTTCTACCA AGGTATTGAG
GACCTTTTCG CCAAGGCTGG ATCAGCAGAC GTAATGGTGC ACGCCTTCGC CCAGTCCGTG
AACCAAATAT ATGCCGCCAT TGGTGAGGAA TACGGCAAAT CGATCCTCGA CAACACCAAC
ACCAAGATCT TCATGCGCTG TTCTGATGCT GAAACATCCG AGTACGTCGT ACGGCATTTC
GGCGTGCGCA ACGTGCTGAC CGGCATTTTC GGGTCCAACC AGGTCACTAC CCGTGAAGTG
GAACAGGACA TTTTGAAAGT GCAGGATATT CTGGGGCTGC AACCAAGGGA ATTCTACATG
CTGACCTACT CCGGTAGGTA CAAGGGTGTG ACTCGTGATG CCAGAGACCC GCAGTTGAAG
ATAGTCTTCC CGTCGGCGCC ATCTTCCATA ACCATGAGCA GAGGGGCCGC ATGA
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| Protein sequence | MFKSSSHRST TNPEFMTSIG NGVQMERPTR IVPISIPDEY RKRHMFVFGT TGVGKTRLCE
NLIEQDIMKG NSVVYFDPKG DQQIFTKIFE VARRAERLKD LMLVTPIFPE YSAVIDPMAY
YFMPDELVGH IVSGIQGGRE PFYRNIAKEI TTAIISANII IADWEKRLPK QNMDTIRQSI
RRSSLSSTMG LLQEIKTPEA LLNAGMIQDI LESPQEYYSK VSSTLRTCLM ELSSGNIGKI
IGQADSNRFI SRLERKKGVI MVVHTGTMIT REAATTLGKV LLSMIQSFIG RVYLSDKQKV
FPPLSIYIDE AQSLFYQGIE DLFAKAGSAD VMVHAFAQSV NQIYAAIGEE YGKSILDNTN
TKIFMRCSDA ETSEYVVRHF GVRNVLTGIF GSNQVTTREV EQDILKVQDI LGLQPREFYM
LTYSGRYKGV TRDARDPQLK IVFPSAPSSI TMSRGAA
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