| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0248 |
|---|
| Symbol | |
|---|
| ID | 6369042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 227290 |
|---|
| End bp | 227796 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642675640 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001950497 |
|---|
| Protein GI | 189423320 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCGAT TACCAGGCAT CTGCCTGCTC ATGATCAGCC TTGTCAGTTT GCCGATTCAG
GCCAAAGCTT TCTGCTTCGA GGAGGCCGGG AGTCAATACG GCATATCGCC ACAGCTGCTC
TGGAGCATTG CCAAGACGGA GAGCAACTTC AACCCCCGTG CGATCAATCG GAACAGTAAC
GGAACCTACG ATTACGGTCT GATGCAGATC AATTCAAGTT GGGCCAAGAG ACTTGGCAAA
ACATGGAATG AACTGGGAGA GCCATGCACG AATGTAAAGG TGGGAGCCTG GGTGCTGGCC
CAATGTATCC AGGATTATGG CTACACTTGG CGGGCTGTCG GTTGTTACAA CTCGCGCACC
CCGTCGAAGG GGGACCGATA CGCCGGGAAA GTGTATCGCA TCCTCGCTGA GCATACAAAG
CCACAGGCGA CGACGCTTAT CGCAGCTATC AGCACACCTA GAATCGATTC ACCATGGGAT
GAGGTGTTCG GCAATGCTGT CCGCTGA
|
|---|
| Protein sequence | MCRLPGICLL MISLVSLPIQ AKAFCFEEAG SQYGISPQLL WSIAKTESNF NPRAINRNSN
GTYDYGLMQI NSSWAKRLGK TWNELGEPCT NVKVGAWVLA QCIQDYGYTW RAVGCYNSRT
PSKGDRYAGK VYRILAEHTK PQATTLIAAI STPRIDSPWD EVFGNAVR
|
|---|
| |