Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0244 |
Symbol | |
ID | 6368211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 222020 |
End bp | 224206 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642675636 |
Product | helicase, RecD/TraA family |
Protein accession | YP_001950493 |
Protein GI | 189423316 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGGA AAGGCACCAC TTCAGATGTC CCGGTCGAAC GGATTTCCGG TTCCGTCGAG AGGGTAACCT TCCACAGCGA GGAATCAGGT TTCTGTGTGC TCCGGATCAA GGTAAAAGGT AAGCGCGAGT TGGTCACGGT CATCGGCAGT GCGGCAACGA TAACCCCAGG TGAATTCGTC GAGTGTGTTG GTACCTGGCA TAACGACAAG ACCCACGGCC TGCAGTTCAA GACTACTCAC CTGAAAACAG TCCCCCCGAG TACCCTGGAA GGCATCGAAA AGTACCTTGG CTCCGGCATG GTCAAAGGGA TCGGCCCCCA TTTCGCCAAA GTACTGGTGA AGGCATTCGG CGTCGACGTC TTCACCGTTA TCGAGGAAAC CCCGGAGAAA ATGCTGTCAC TCCCCGGCAT TGGCAAGAAA AGGACGGATA AAGTTACCGC TGCCTGGGCA GAGCAGAAAG CGATCCGGGA GATCATGGTT TTCCTCCAGT CCCATGGTGT CGGGACCGGT CGGGCGGTCA GGATCTACAA AACTTATGGC GATGAGGCCA TCATCAAGGT GTCTGAGAAC CCCTACCGCT TGGCTCTCGA CATTCACGGA ATCGGTTTCA AGACCGCTGA CGTCATTGCC GACAGGCTGG GTATTGCCCC GGACTCACTG ATCCGGGCTC AGGCCGGCGT GCGCCATGTA TTGCAGGAGT TGTCCGGCGA CGGCCATTGT GCCGCCACCC ACGACACCCT CATCAAGGAG TCGGTAAAGC TTCTGGAGAT TGACGAGGCA ATCCTGGAAG AAGCGATCCG GGAGGAAGTC ACCCAGGAAA ACCTGGTGCC GGAAGAAATC GACGACGTTC CCTGTCTGTT TCTGTCCGCG CTTCACCGGG CTGAACTGGG AGTGGCGAAC AGCGTCAGGA GAATACTGAG TGGAGAGCCG CCATGGGGCA AAATCGATAT GGAAAAGGCG CTCCCCTGGG TGGAAGAGAA GACGGGCCTT TCACTCTCCC AGTCGCAGCA GGACGCTGTA TGCCTTGCTT TAACCAGCAA AGCACTCGTC ATCACCGGCG GCCCGGGCAC CGGCAAGACG ACCCTGGTCA ATAGCATCCT GAAGATCCTC GCAGCCAAAC AGCTCGAAAT CCTGTTGGCC GCCCCGACCG GACGCGCGGC CAAGCGGATG ACCGAGACTA CAGGACGGGA GGCCAAGACC ATTCATCGCC TCCTGGAGTT TGATCCCCAG AGTTTCGGTT TCAAACGCGG GCGAGACAAC CCTCTCGAAG CAGACCTCAT AGTCATTGAC GAATCATCTA TGGTGGATGT GGTGCTGATG AACAAGCTCC TCGCGGCAGT CCCCGAAAGC ACCGCTCTGA TGATTGTTGG CGATGTAAAT CAGCTGCCTT CAGTCGGTCC CGGTGCGGTG CTGGCCGACA TCATCACATC CGGTTCTGTC CCGACCGTCA GGCTGACCGA GATTTTCCGC CAGGCAGCCA CCTCAAAGAT CATCGTCAAT GCCCACCGGA TCAACAAGGG AGAGTTGCCG CTGAGAAATG AAACGGAAGA GCTATCCGAC TTCTACTTCA TACCGGCAGA AACTCCGGAA GAAATTCACG CCAAGCTACT GCAGGTGGTT ACCGAACGCA TTCCGAAGCG CTTCGGCCTG CATCCGGTCA AGGATGTCCA GGTTCTCACC CCGATGAACC GGGGAGGACT GGGCGCTCAC GCCTTGAACG CGGAACTCCA GAAAGTGCTC AATGGGAACA GCGAGCCCAA AATAACCCGC TTTGGAACGA CGTACTCGCC GGGTGACAAG ATCATCCAGA CGGTGAATAA CTACGACAAG GAAGTCTTCA ACGGGGATAT TGGCCAGATT CTTGAAATCG ATACCGAGGA AAGCTCCCTC AAAGCTGATT ACGACGGTAG AATAGTCGAG TATGAATTTG GTGAACTGGA CGAGGTGTCG CTGGCCTATG CCACCAGCAT CCATAAGAGC CAGGGTTCAG AGTACCCAGC TGTCGTGATT CCACTGGCAA TGCAGCATTA CATGCTGCTG GAGAGGAATC TGATCTATAC GGCCGTCACG CGGGGGAAAA AACTGGTGAC GATCATCGGC CAGCCCAAGG CATTGGGTAT GGCGGTGAAG AATAAAAATG CCACAAAGCG TTTGACGAAT TTGACAGCGA GGCTGCGTTC CGCATGA
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Protein sequence | MNGKGTTSDV PVERISGSVE RVTFHSEESG FCVLRIKVKG KRELVTVIGS AATITPGEFV ECVGTWHNDK THGLQFKTTH LKTVPPSTLE GIEKYLGSGM VKGIGPHFAK VLVKAFGVDV FTVIEETPEK MLSLPGIGKK RTDKVTAAWA EQKAIREIMV FLQSHGVGTG RAVRIYKTYG DEAIIKVSEN PYRLALDIHG IGFKTADVIA DRLGIAPDSL IRAQAGVRHV LQELSGDGHC AATHDTLIKE SVKLLEIDEA ILEEAIREEV TQENLVPEEI DDVPCLFLSA LHRAELGVAN SVRRILSGEP PWGKIDMEKA LPWVEEKTGL SLSQSQQDAV CLALTSKALV ITGGPGTGKT TLVNSILKIL AAKQLEILLA APTGRAAKRM TETTGREAKT IHRLLEFDPQ SFGFKRGRDN PLEADLIVID ESSMVDVVLM NKLLAAVPES TALMIVGDVN QLPSVGPGAV LADIITSGSV PTVRLTEIFR QAATSKIIVN AHRINKGELP LRNETEELSD FYFIPAETPE EIHAKLLQVV TERIPKRFGL HPVKDVQVLT PMNRGGLGAH ALNAELQKVL NGNSEPKITR FGTTYSPGDK IIQTVNNYDK EVFNGDIGQI LEIDTEESSL KADYDGRIVE YEFGELDEVS LAYATSIHKS QGSEYPAVVI PLAMQHYMLL ERNLIYTAVT RGKKLVTIIG QPKALGMAVK NKNATKRLTN LTARLRSA
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