| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0171 |
|---|
| Symbol | |
|---|
| ID | 6366173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 162723 |
|---|
| End bp | 163523 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642675568 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001950425 |
|---|
| Protein GI | 189423248 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.389307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC TGCTCATACT GTTCACGGCG CTGTTGTTTC TGCTGGCCGC TCTACCTGCC
CTGGCTGCCC CGGCTCAGCT GACCTGGTAC GGCCATGCCG CCTTCAAGGT GGTCACGCCC
AACGGCAAGG TGCTGCTGGT GGACCCCTGG ATCAGCAACC CCTCCAACCC CAACGCTGAA
AAGGATCTGG CAGCACTGAC CAAGGTTGAC CTGATCTTTC TGACCCACGG CCATGGCGAC
CATATCGGTG ATGCGGTCGA AATCGCCAAG AAGACCGGTG CCAAGCTGGT GGCCACCTTT
GACCTGCAAA AGGCGATGGT GGCCTACAAA GGCTTCCCTG CCAAACAGGC CGAGCGGGCC
GAGACCGGCA GCTTTGGCGG CACGATTTCA CTTTTGGATG GCGAGGTCAC GGTGCTGTTC
GTGCCGGCCA TCCATGGTGC CAGCATGGAT ACCCCCAACG GCCCGGTCTA TGCCGGTGAG
CCGGGAGGCT TCCTGATCAG CGTCAAAAAC GGCCCCCGCA TCTACCATAC CGGCGACACC
GACCTGTTCA GCGATATGGC GCTGTTGAAA GGCCAGGTGG ATCTGATGCT GCTCTGCATC
GGTGACAAGT TTACCATGGG GCCGGTCCGG GCAGCCCAGG CCGTGGATAT GATCCGGCCC
AAGAAGGCCA TCCCGATGCA CTTTGGCACC TTTCCGGCCT TGTCCGGCAC CCCGGAAGAG
TTCAAGAAGG CGCTGCGCCG TTATGGTCTG GAGTTCCTGA TGTACCAGAT GAAGGTGGGG
GAAACACTGA CCTGGAAGTA A
|
|---|
| Protein sequence | MKRLLILFTA LLFLLAALPA LAAPAQLTWY GHAAFKVVTP NGKVLLVDPW ISNPSNPNAE
KDLAALTKVD LIFLTHGHGD HIGDAVEIAK KTGAKLVATF DLQKAMVAYK GFPAKQAERA
ETGSFGGTIS LLDGEVTVLF VPAIHGASMD TPNGPVYAGE PGGFLISVKN GPRIYHTGDT
DLFSDMALLK GQVDLMLLCI GDKFTMGPVR AAQAVDMIRP KKAIPMHFGT FPALSGTPEE
FKKALRRYGL EFLMYQMKVG ETLTWK
|
|---|
| |