| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0038 |
|---|
| Symbol | |
|---|
| ID | 6365864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 39136 |
|---|
| End bp | 40092 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642675439 |
|---|
| Product | conserved hypothetical radical SAM protein |
|---|
| Protein accession | YP_001950296 |
|---|
| Protein GI | 189423119 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCGT TTTCATCAGA ACATATCCAT CCTGACCTGC GGATCAACTC CTATGGCCAC
TACCTGCGCC GCAGGTTCGG TTGCCGGGTC AGCAAGGTCA ATGTGGATGC CGGCTTTACC
TGCCCCAATC GTGACGGCAG CAAAGGTACC GGCGGCTGCA TCTACTGCAA TAACGTCTCC
TTTTCTCCCC GCGATACCCT GGCCGAGATC CCGCTTGAAG AGCAGGTTAC AACCGGGATG
GCCTATCATC ACAGGCGTCT GGAGTCAGAT AAATTCATTG TCTATTTCCA GAAATACACC
AATACCTATG CCTCGGTCGG CCATCTTGCA GAGCTCTACC AGCGTGCACT GGCGCTGCCC
GATGTGATCG GGATTTCGGT CGGCACCCGG CCTGATTGCC TGACTGATGA GGCACTGGAG
CTGCTGACCA CACTTGCCAG GGATCATTAC GTCTGTCTGG AGCTGGGGTT ACAGTCAGCC
GATGACGCTA TTCTGGAGCA GATCAACCGC GGGCATTCCC TGGATGATTT TATCACGGCG
GTTAAACGTG CCTCCGGTCG CGGCCTTGAT ATCTGCGCCC ATCTGATCTA CGGCTTTCCC
GGAGAGCAGC CGGAGGAGTT TGTCAAATCT GCAGACCTGC TTGATTCGCT ATCGTCAATC
ACCTCGGTCA AACTGCACCA GTTGCATGCC GTGGAAGGGA CCGAACTGGC TGCCATGTAT
CGCCGGGGCG CCTTTGATCC GATCAGCCTT GAGCAGTATG TCAACACTGC AGCTGATTTT
CTGGAGCGGT TACCGTCCCG GATCAGCATC CAGCGCCTGT ACGGCTCATC ACCGCTTGAA
ATCAGGGTTG CCCCGCAATG GGGTTTGAAG AATAACCAGA TGTGGTATGC TGTGTTAAAC
GAGTTGAAGC GCCGGGGCAG TTGGCAGGGA TGCAAGAAAC TCGCCGCGGT TAGTTGA
|
|---|
| Protein sequence | MSAFSSEHIH PDLRINSYGH YLRRRFGCRV SKVNVDAGFT CPNRDGSKGT GGCIYCNNVS
FSPRDTLAEI PLEEQVTTGM AYHHRRLESD KFIVYFQKYT NTYASVGHLA ELYQRALALP
DVIGISVGTR PDCLTDEALE LLTTLARDHY VCLELGLQSA DDAILEQINR GHSLDDFITA
VKRASGRGLD ICAHLIYGFP GEQPEEFVKS ADLLDSLSSI TSVKLHQLHA VEGTELAAMY
RRGAFDPISL EQYVNTAADF LERLPSRISI QRLYGSSPLE IRVAPQWGLK NNQMWYAVLN
ELKRRGSWQG CKKLAAVS
|
|---|
| |