| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0028 |
|---|
| Symbol | |
|---|
| ID | 6369043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 30849 |
|---|
| End bp | 32444 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642675429 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001950286 |
|---|
| Protein GI | 189423109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.288643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTAA ATGCTGTTAG TAGACTTCGT ACACTTGACA CCAGTTACCG TGAACGAAGG
CGGATTGTCA GGCTGCTTGA TTTTCTGACA CGTGACGAAC TGACCCGTGA TCAGCTGGAG
CGGATCGGCC GGCGTTTGCA GAAGTCGGGG CGGCGGGCCC TGCCGCCGCT GGTCAGACGG
CTCTGGCAGG AGCAGGATCA TGAGCGGATC TATCGCTATA CCTGCATGCT GGACTTTTTT
GATGCCACCA TCTGGCTGGA CCAGCTGGTG GCGTTAACCC TTAAACGCCG CGATCTGGCT
GATGAAGGCA GACTGCCTCT GTTGGAAATT CTGCAGGATT ACGGCATTGA TGTCTCCTCC
CCTCCCTTTT CCCGTGATGA GGTCACTGGC GCAACCCTGA ACAGTTTCCT CGACCTCTGT
CTGCAGGAAG GTTCCTGGGG CATGGTCCGC TTGATGGATC GCTTCCTGAA TGCGGACGAG
ATGCTGCGGG ACCAGCTGAT CCGCCGCCTT GGCAGCCGGG CTGACCAGGG GGCTGCAGCC
GCGGCATGTC TGAGAATGCT GGCCTGTTTC GAGTACCGTG AAGTCGCCGA TCTGGCGGTT
GAGAGCCTGG GTACCCTGCG GCACGGCTGT GCGCTGCAGG TGCTGCAGTC CTTGCACGAC
CTACCGGTAG AGGGGCTTGA AGAACGGATC AGCCGTAGTA TCCGGCGGCT GGGCTTTCTG
GGGATCAGAG AGTCTGAACC GCTCCCTGAT CTGTTTGCAG AGCCGGCTGC ACTGCTGATG
GCCCAGGCAA CGCCTCTGGA CTGTTATGGG GTGCGGACAC TCTGGTTTTC CTGGGAACTG
TGCGATACCA CCCTGGCAGG AATCGTGCTG CAACTGGGGG ATCAGGACGG TGTGCGGCAT
GCCGTGGCTT CGCGTTTCCA GAACCGTCGC GAGCATGATG ACTACCTGGA TGAGATCAAC
GCGGAAGAAG GCCTGTATCC GGTGGGATAT GCCTATGCCG TCAATGTGCT CAAGGATGCC
CTGCAACAGA GTATTGAGCG CAGCTTCTAT CTGCCGCCGG ACCTCTATGC ATGGCGCTAC
CTGTTTGGTG AGACTGACCT GCGACCAGCC GACTATGTCC CCGGCTTCCC GGTGGAACTG
CTTGATGGCC TGCTGGACCG GATGGCGTCA CTGCTGGCCG GTTGTGAAGA GTTGCTGGAC
GAACCGTTTT TTGAAGGCTG GCTTTTTACC GATCCTCTGA TATATGAACT GGCTGAAGGC
TGTGGGACCA CCCCCCTCGG CAGCTGTTCT CCGGATACGC AGCAGTTGGT CATTGAGCGT
TTCTGTACTG AACTGATTGA GCCGGATAAA CCTGCGTTGC TGCGTCGATT GTTGTTAAGT
GCCGATTTCA TGCAACAAAC TGACTGCCGG AAGCAGAGTA TCCAGCAGGT GCTCGCATTA
GGGCTCAGTC TGGCCGGATC ACAGCTGCCG CTGAGCCGTC ACCCCTTTAT CAGACGACTG
GGGTTTGACA GTATCGAGAT GGCTCGCCAG GCCATGGTGG AAGGGTTTGA TCCGCGCGCT
AAACAGGCGT ACGACGATGA TGAGGAGTGG GAATGA
|
|---|
| Protein sequence | MELNAVSRLR TLDTSYRERR RIVRLLDFLT RDELTRDQLE RIGRRLQKSG RRALPPLVRR
LWQEQDHERI YRYTCMLDFF DATIWLDQLV ALTLKRRDLA DEGRLPLLEI LQDYGIDVSS
PPFSRDEVTG ATLNSFLDLC LQEGSWGMVR LMDRFLNADE MLRDQLIRRL GSRADQGAAA
AACLRMLACF EYREVADLAV ESLGTLRHGC ALQVLQSLHD LPVEGLEERI SRSIRRLGFL
GIRESEPLPD LFAEPAALLM AQATPLDCYG VRTLWFSWEL CDTTLAGIVL QLGDQDGVRH
AVASRFQNRR EHDDYLDEIN AEEGLYPVGY AYAVNVLKDA LQQSIERSFY LPPDLYAWRY
LFGETDLRPA DYVPGFPVEL LDGLLDRMAS LLAGCEELLD EPFFEGWLFT DPLIYELAEG
CGTTPLGSCS PDTQQLVIER FCTELIEPDK PALLRRLLLS ADFMQQTDCR KQSIQQVLAL
GLSLAGSQLP LSRHPFIRRL GFDSIEMARQ AMVEGFDPRA KQAYDDDEEW E
|
|---|
| |